Detailed information of SKAU_T00310820 in Synaphobranchus kaupii Gene info
Gene IDAnnotationChromosomeStartEndStrand
SKAU_T00310820INTERFERON REGULATORY FACTORCM056388.11826836818315701-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Transcription Factors FamilyIRF

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00605IRFInterferon regulatory factor transcription factorDomainInterproscan
PF00782DSPcDual specificity phosphatase, catalytic domainDomainInterproscan
PF02936COX4Cytochrome c oxidase subunit IVFamilyInterproscan
PF10401IRF-3Interferon-regulatory factor 3FamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000340DomainDual specificity phosphatase, catalytic domainInterproscan
IPR000387DomainTyrosine-specific protein phosphatases domainInterproscan
IPR001346DomainInterferon regulatory factor, DNA-binding domainInterproscan
IPR004203FamilyCytochrome c oxidase subunit IV familyInterproscan
IPR008984Homologous_superfamilySMAD/FHA domain superfamilyInterproscan
IPR016130Active_siteProtein-tyrosine phosphatase, active siteInterproscan
IPR017855Homologous_superfamilySMAD-like domain superfamilyInterproscan
IPR019471DomainInterferon regulatory factor-3Interproscan
IPR019817Conserved_siteInterferon regulatory factor, conserved siteInterproscan
IPR020422DomainDual specificity protein phosphatase domainInterproscan
IPR029021Homologous_superfamilyProtein-tyrosine phosphatase-likeInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR036390Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan
IPR036639Homologous_superfamilyCytochrome c oxidase subunit IV superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR11949INTERFERON REGULATORY FACTORInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000976Molecular Functiontranscription cis-regulatory region bindingInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0002376Biological Processimmune system processInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005751Cellular Componentobsolete mitochondrial respiratory chain complex IVInterproscan
GO:0006123Biological Processmitochondrial electron transport, cytochrome c to oxygenInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0006470Biological Processprotein dephosphorylationInterproscan
GO:0016311Biological ProcessdephosphorylationInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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