| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| SKAU_T00267910 | COILED-COIL ALPHA-HELICAL ROD PROTEIN 1 | CM056385.1 | 24173287 | 24222128 | + |
| CDS | |||||
| SKAU_T00267910 | |||||
| Transcript |
| SKAU_T00267910 |
| Protein |
| SKAU_T00267910 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00060 | Lig_chan | Ligand-gated ion channel | Family | Interproscan |
| PF00497 | SBP_bac_3 | Bacterial extracellular solute-binding proteins, family 3 | Domain | Interproscan |
| PF01094 | ANF_receptor | Receptor family ligand binding region | Family | Interproscan |
| PF07111 | HCR | Alpha helical coiled-coil rod protein (HCR) | Coiled-coil | Interproscan |
| PF10613 | Lig_chan-Glu_bd | Ligated ion channel L-glutamate- and glycine-binding site | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001320 | Domain | Ionotropic glutamate receptor, C-terminal | Interproscan |
| IPR001508 | Family | Ionotropic glutamate receptor, metazoa | Interproscan |
| IPR001638 | Domain | Solute-binding protein family 3/N-terminal domain of MltF | Interproscan |
| IPR001828 | Domain | Receptor, ligand binding region | Interproscan |
| IPR009800 | Family | Coiled-coil alpha-helical rod protein 1 | Interproscan |
| IPR019594 | Domain | Ionotropic glutamate receptor, L-glutamate and glycine-binding domain | Interproscan |
| IPR028082 | Homologous_superfamily | Periplasmic binding protein-like I | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR46822 | COILED-COIL ALPHA-HELICAL ROD PROTEIN 1 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005216 | Molecular Function | monoatomic ion channel activity | Interproscan |
| GO:0005814 | Cellular Component | centriole | Interproscan |
| GO:0006611 | Biological Process | protein export from nucleus | Interproscan |
| GO:0006811 | Biological Process | monoatomic ion transport | Interproscan |
| GO:0015276 | Molecular Function | ligand-gated monoatomic ion channel activity | Interproscan |
| GO:0016020 | Cellular Component | membrane | Interproscan |
| GO:0030154 | Biological Process | cell differentiation | Interproscan |
| GO:0038023 | Molecular Function | signaling receptor activity | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |