Gene detail

Detailed information of SKAU_T00260720 in Synaphobranchus kaupii Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
SKAU_T00260720	EXPORTIN 4,7-RELATED	CM056384.1	68580430	68616446	+

Gene Structure

More details in Jbrowse Sequence

CDS

SKAU_T00260720

ATGGAGCTGCTGCTGTTGACCTTGACCGGGAGATCACTGGGCCGCCACTACATCGCCATGTTTGAGTCCTCCCACAACGTGTCACTCAAACCCACTGAGTCCTGGAGGGAGGCGCTGCTCGACACCAGGGCTATGGATCTCTTCTTTACGGTGCACAGGAAGATCCGGGAGGATTCAGACATGGCTCAGGACTCGCTGCAGTGCTTGGCCCAGCTGGCCTCCATGCACGGTCCCATCTTCCCCGACGAGAGCGCCCGCGTTTCCTACCTCGCTCACCTGGTGAAGGGACTACTGAGTATGATCAACGGGATTGAGATGGAGGACTCTGAAGCCGTGGGAATCTCGAACATCATCAGTAATCTCATCACCAATTTCCCCCGGAGCATCCTGACGGCCCTGCCTAGCGAGCTCTTCTCCTCCTTCATCACCTGTCTGACTGTCCTCACATGTTCTTTCGGCCGCAGTGCTGCTCTGGAGGAAGTGCTGGATAAGGATGACATGGTGTACATGGAGGCGTACGATAAGCTGCTGGAGTCGTGGCTCACATTGCTGCAGGATGATGAGCATTTCCCTAAAGGCTGCTTCGTCCAGCCGGCCGTGCAGGTCTTCAACTCCTATATCCAGTGTCACCTGGCCGCTCCTGACGGCACACGCAACCTGACCGCTAATGGCGTAGCCTCTCACGAAGAGGAAGAGATTAATGAGCTCCAGGAGGACGACCGCGAGCTCTTCTCCGACCAGCTGGCCAGCATCGGCGTGCTGGGGCGTATCGCCGCTGACCACTCCATTCCGCTGCTGAGCAGTTTGCTGGAGGACCGCGTGACCCGGCTACACGGACAGCTCCAACGGCACCAACAGCAACTCCTCGCCTCACCCGGCCCCGGGTCCGTGGACCGGAAAGTTCTAGATGACCTCTACGAGGACATCCACTGGCTCATCCTAGTTACAGGGTACCTCCTGGCGGACGACCCTCAGAGCGAGACCCCTCTCATCCCGTCGGAGGTGATGGAGTATTCCATAAGCCACTCCACGGAGGTGGACATGAACACAACGCTTCAGGTCCTGGGATCGCCGGGAGAGAAGGCCTCCTCTATCCCAGGATGCAACAGGACAGACTGTGTCATCAGGTTGCTCTCTGCGGTGCTGCGAACGTCGGAGGTGGAGTCTCGGGCGACCCAGGCCAGCCTCACTGAGCTTCTGAGCCCACAGATGGGCAAAGACATCATGTGGTTCCTCAGACGCTGGGCCAAGACCTACCTGCTCGTGGACGAGAAGCTGTACAGCCAGATAAGCTTGCCTCTCAGCATGGCGTTTGGGGCAGACACGGAAGGGGCCCAGTGGATTGTGGGATACCTGCTGGAGAAGGTGATCAATAACCTGTCGGTGTGGAGCTCAGAGCCGGAGCTGGCCAACGACACGGTGGAGCTGCTCGTCACTCTGGTGGAGcggagagagagGGCTAATGTTGTGATTCAGTGTGAGAACTGGTGGAATCTGGCCAAGCGGTTTGCCACCCGCAGTCCCCCGCTCAACCTGCTGTCCAGCTCGGTACAGCGCACACTGATGAAGGCGCTGGTTTTGGGCGGATTCGCGCACATGGACTCGGACACCAAACAGCAGTACTGGACCGAGGTCCTGCAGCCACTGCAGCAGAGGTTCCTCAACGTGATCAACCAGGAGAACTTCCAGCAGATCTGCCAGGAAGAGGAAGTGAAGCGTGAGATCATCGCCACGCTTGAGGCCCTGTGCGGCATCGCCGAGGCAACACAAATCGACAACGTGGCCGTCCTCTTCAACTTCCTCATGGACTTCCTGTCCAACTGCATTGGCCTGATGGACGTGTACCGGAGCACGCCTGAGACGGTCAACCTCATCATCGAGGTGTTTGTGGAGGTGGCGCACAAACAGATCTGCTATCTGGGAGAGtccaAGTCTATGAAGCTGTATGAGGCGTGTCTGACGCTGCTCCAGGTGTACTCTAAGAACAACCTGGGCCGTAAGCGTGTGGACGTGACCGCTGAGGAGGACCAGTATCAGGATCTTCTGCTTATCATGGAGCTGCTCACTAACCTGCTGTCCAAAGAGTTCATTGACTTCAgcgacacagACGAGGTGTTTCGGGGTCAGGAGCAGGGCCAGGCGGCAGGCCGGACGGTTTCGGCGGCGGATGTGGTTCTGTATCGGGGTCAGGAGCAGGGCCAGGCGGCAGGCCGGACGGTTTCGGCGGCGGATGTGGTTCTGTACGGGGTCAACATCGTACTGCCACTCATGTCTCAAGACCTGCTGAAGttCCCCTCCCTGTGTAACCAGTACTACAAGCTCATCACCTTCATCTGTGAGATTTTCCCAGAGAAGATTCCCCAGCTGCCGGAGGAGCTGTTTAAGAGCCTCATGTTCTCACTGGAGCTCGGAATGACCTCGATGAGTTCAGAGGTCAGTCAGTTGTGTCTGGAGGCGCTGACCCCTCTCGCTGAGCAGTGTGCAAAGACCCAGGAGACGGACACGCCTCTGTTTATCGCCACCCGCCACTTCCTGAAGctgGTGTTTGATATGCTGGTGTTGCAGAAGCACAACACTGAGATGACTGTAGTAGCAGGTGAAGCTCTCTACACACTAGTGTGCCTGCATCAGGCGGAGTACTCTGAGCTGGTGGAGACGTTGTTGTCCAGCCAGAGGGACGCGGTGATTTACCAGCGGCTGGCCGACGCCTTCAACAAGCTAACAGCCAGCAGCACGCCGCCCAGCATGGACAGGAAGCAGAAAGTGGCCTTCCTGAAGAGCCTGGAGGAATTTGTGGCCAACGTGGGGGGGCTGCTCAATTGCATTCAGGTGTCTCGTGCGATGAGTGACAGCGACGATGACGCGCCGCAGCTGTGCGCGCGCACTCTGGCGGCTCTACAGGAGTTCTACGCGGAGACGAGCGGGCTGGACAAGCAAATCCCGCCAGAAGAAAAGTTTTCTGTTGGGGCTGTAGAGGAGgactggCGCATGAGCCAGTTCTGGTATAGCGATGAAACGGCGCGGCGGCTTGCTGAGGAGGTTCTACAGGCAGCCGGGGACGGGGGCAGGATAGCGTGTGTGAGCGCTCCCAGCGTGTATCAGACGCTGAAGCGGCTCGACTCGAGCACGCCCGCCACGCTGCTGGAGTTTGACCACCGCTTCTCCGTCTATGGCGATGAGTTTGTGTTCTACGACTACAACGACCCGCTGTCCCTCCCGGAGGACTGGGCGCCTCAGAGCTTCGACATGGTCATCGCGGACCCCCCCTACCTTTCCCAGGAGTGCCTCAGCAAGGTGGCGCTGACTGTCAAATTCCTGACGAAGGGGAAGGTGCTTCTGTGCACAGGTGCCACCATGCAGGAAGATGCAGAGAAGCTCCTGGGTCTGAAAATGTGCTCGTTTCTCCCCAAACACACCCATAACCTGGCCAATGAGTTCCGCTGTTACGTCAACTACCAATCTGGTCTCGACTCATGA

Transcript

SKAU_T00260720

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08767	CRM1_C	CRM1 C terminal	Repeat	Interproscan
PF10237	N6-adenineMlase	Probable N6-adenine methyltransferase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002052	Conserved_site	DNA methylase, N-6 adenine-specific, conserved site	Interproscan
IPR011989	Homologous_superfamily	Armadillo-like helical	Interproscan
IPR014877	Domain	Exportin-1, C-terminal	Interproscan
IPR016024	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR019369	Family	Protein-lysine N-methyltransferase Efm5/EEF1AKMT1	Interproscan
IPR041370	Family	Methyltransferase EEF1AKMT1/ZCCHC4	Interproscan
IPR044189	Family	Exportin 4/7-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12596	EXPORTIN 4,7-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0005049	Molecular Function	nuclear export signal receptor activity	Interproscan
GO:0005643	Cellular Component	nuclear pore	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0006611	Biological Process	protein export from nucleus	Interproscan
GO:0008168	Molecular Function	methyltransferase activity	Interproscan
GO:0016279	Molecular Function	protein-lysine N-methyltransferase activity	Interproscan
GO:0032259	Biological Process	methylation	Interproscan
GO:0051169	Biological Process	nuclear transport	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-