Detailed information of SKAU_T00255570 in Synaphobranchus kaupii Gene info
Gene IDAnnotationChromosomeStartEndStrand
SKAU_T00255570RHO-TYPE GUANINE NUCLEOTIDE EXCHANGE FACTOR, ISOFORM FCM056384.15193742351972657-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|SH3

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00307CHCalponin homology (CH) domainDomainInterproscan
PF00621RhoGEFRhoGEF domainDomainInterproscan
PF07653SH3_2Variant SH3 domainDomainInterproscan
PF16615RhoGEF67_u1Unstructured region one on RhoGEF 6 and 7DisorderedInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000219DomainDbl homology (DH) domainInterproscan
IPR001331Conserved_siteGuanine-nucleotide dissociation stimulator, CDC24, conserved siteInterproscan
IPR001452DomainSH3 domainInterproscan
IPR001715DomainCalponin homology domainInterproscan
IPR003096FamilySmooth muscle protein/calponinInterproscan
IPR035788DomainRho guanine nucleotide exchange factor 6, SH3 domainInterproscan
IPR035899Homologous_superfamilyDbl homology (DH) domain superfamilyInterproscan
IPR036028Homologous_superfamilySH3-like domain superfamilyInterproscan
IPR036872Homologous_superfamilyCH domain superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR46026RHO-TYPE GUANINE NUCLEOTIDE EXCHANGE FACTOR, ISOFORM FInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005085Molecular Functionguanyl-nucleotide exchange factor activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0030027Cellular ComponentlamellipodiumInterproscan
GO:0030032Biological Processlamellipodium assemblyInterproscan
GO:0035556Biological Processintracellular signal transductionInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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