Gene detail

Detailed information of SKAU_T00251980 in Synaphobranchus kaupii Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
SKAU_T00251980	TYROSINASE FAMILY MEMBER	CM056384.1	36974405	36991528	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

SKAU_T00251980

AGCCAAATCCTTCCCAGTATGACTTGGAGGCTGAGTATAAATTGGAGGTATTGTTAATGCTTGAGCTCCGAACAGCAGCAGATACTGCTTTCTTAGAGGATGCACTGCATAAACATAATAACTTTTGGGTGCTTCAAATTCATAATATACACAACTTAAAACCCTTACAGGAGCATTAGATTTGATTGCACGCATCATTGGATTGACAAATTGAAGCATATCACCACAGGTCATTGGTGTGCAAATCGATTGACTGGACGTTTAGAAAGGATAATATCAAATACATGTCTTTCACTGGGAGTGCAAAGATGAGGGGAATGCTGCTGATCTTCCTTGTGGTTTTTGTGACGTGGCCCCACGTGGCTGATGCGCAGTTTCCCAGAGTCTGCTGCACGGTAGAAGGGATACTGTCCAAGCAGTGCTGTCCTTCCTTCAGCTCCGATCCGGCAGACCTCTGTGGCACTTTGTCTGGCCGTGGAAACTGCACCGATGTGCGGGTGGACACAAAGCCATGGAGTGGCCCTTACAGACTAAGAAATGTCGATGACCGGGAAAGATGGCCGACAAAGTTCTTTAACCGAACTTGCAGGTGCTCAGGAAACTTTTCAGGGTACAACTGCGGAGAGTGTAAGTTCGGGTGGACAGGCCAGAATTGTGACCAGCGCAAACCCCCCGTCGTGCGCAAGAACATCCACGTTCTGACCCCTGCCGAGCTCCAAGAGTTCCTGGACGTTCTGGACCTCGCCAAGACCACCATCCACCCCGACTATGTCATCGCCACCCAGCACTGGATGGGCCTTCTGGGGCCCAATGGAACCCAGCCCCAGGTCAACAACGTCTCCATCTATGACTTATTTGTGTGGCAGCACTACTACTCTGTCAGAGACACACTCCTCGGTCCAGGACGTCCATTCAAAGCCATTGATTTCTCTCACAAAGGACCAGCGTTCATCACATGGCACAGGTACCACCTGCTACGTCTGGAGAGAGAACTACAGAGGCTGACGGGGAACGAGAACTTTGCGGTCCCTTACTGGAACTTTGCCACGGACCAGACAACCCCTCCCTCATCAGTCCCCAGTCCAGGTTTTCACGATGGGGGGGTGGTGTGCAACAGTCTGGACCAGTATAACCAACTGGTGACCCTCTGCAATGGGACCAGTGAGGGAGTTTTAATGAGAGGTTTTCCAGAGAGCACCAATAACAACCTGAGCCTGCCCACCATGAATGATGTCAGGAGCTGTCTCAACCTGAAAGATTTTGATAGCCCTCCCTACTTCACCAACTCCACATTCAGCTTCAGGAATGCTCTGGAAGGCTATGACAGGCCGAATGGTGAGCTGGACAGCTCGGTGACAAACCTCCATAACCTAGTCCATTCCTTCCTGAATGGGACCAGTGCCCTGTCACACGCCGCTGCCAATGATCCGATCTTCCTGGTACTCCATGCTTTTACAGATGCCATATTTGACGAGTGGATGCGACGGTTTGTTCCACCAAACTCCAGCTTTCCAGATGAGATGGCACCCATAGGTCACAACAAGGACTACAACATGGTGCCATTTTTCCCCCCGGTGACAAATGAAGAAATCTATGTCACCGCGGAGCAGTTGGGATACTCCTATGCCATTGAGCTGGACGACACGAACAGCACCGCAGTGGTGGTTCTGTTGGGCTCCACGCTGGGCGGTGTGTTCCTGGGCCTCCTGGTTCTGTTGCTCCTCCTGGTGCTCTATATACAGCAGAGAAGAAAACGAGATCGGGACTTCGAGCCTCTCATCAAGGCCGAGTTCACCACCAAGAAGTACACAGAGGAGGCTTAGAATAAGCCTTCCCCAAACCACAAATGATCTCAACCAAGTATTTGTAAAATCTTCCTTATTCTCTGTGACACTGATGTACAAATGTGTATCCAAGATTTATTCAAAAAGAATATACTGAAAAACAATTACGTTGGTCACTATCATTTTCTTAAATATGCAAAATTGTGTGGATTTTACATGCAGTTATCTTCTCTGAAACTACAGAAGTGTTTTGCTGCCatattgtttaaaaaatgtaaactatGCAAGAGGATTACCATGTCATTATGTGATAAGTGCATTATGTAATAATGTCATCAAAGATTATGAATAATGTCTATTAAATGTCCTTATTTATTGGCCATCCAGACAAACACTGCTGCTGTATAAGGTACTTTATCTGAACGGTttcagtatccagctgtagaaagaGATAACAGGTAAAAATAAAAGTGAGTCAAGGCATTAGTCACCTTCAGATTACGATTCAACAACTGAATAGAAATGTAGATAACACTGGTACTTGTGGTGAAATGTGCATAGACCTACGAAACACATAAGCCACAACAAGTGATTATTTTTAGTAAATGTTTATTTGCACACCATTATTTATCTGTATACAAGAAAGAGTAAGAAAAAACCCAAAATGCAAACcatttttatctttttaaaaaattgtaaggCATGTCTGCTTTTTACGACTTGAATGTCGTGTTAAAACCGCCCACCTCGTTAGCCTAAAGCAGCGCTTCCCCTCTGTAGCTGCAAGCCCCTATCAGTGCTCTCCAAACTGTTGTACACCAAAATGCAACTAAATGATCTGGTAGCACATTTTCTGACCTGGCTGTTCAATACTATATCTACTGATATGGGGGAAATCTTCCACAAAATCAAAATGTgataagagggagggagagagagaaagagaggttttAGAATGCAACTGGAGGTTTGACCGACATGCACACACTGTTGCAAACCAGTTATGCTTGGAGAAACCCAAGGAAGTACAAATGTACTTCATCTCATGTTCCTCATAAGGGATTTTGCACTTGTAGGGAACAGCCATAGAAGCAGATGATGACGATAGACACAGGACCTGttaatttttgcaaatttattaaaaatctgaaactgaaatctctcatttacataagtattcataccctttgctttaatggatttttaaagtatatttaatatttggtcgcatagcctttgcatgctgttacttcctgaagtctgtgacccataaacatcaaaagactcgatatcttattttcaggtactgttacaagcaatactataacctctctgcatttgaattgatctctatgggaattgggggatgagacaagattcagctgtaaattacactggtacagtatggaacacatggctggctaaatggctgtaagtcagcaagggtctgagctatcgaacgagccccaaaccatcactctgttgccagatatggagtagatgtggatggatcactgcaagagttatttctcctgactcattttcctatagaactctggtgaaaaaagcaaaaatgttaaagcaaagggtatgaatacttatgtaaatgggagatttcagtttttgatttttaataaatttgcaaaaatctctaaaatcatgttttcactttgtcattatgggttattgaatgtagattgatgggcaaaaatggcaattttatcaatttaaaattaaatcaacacaataaagtgtgcaaaaagtgaaggggtatgaatagtTTCCGTTCCCACTGTACATTGCTTTTGCCAATGACTAGGAGCCAGTGTTTTCAGTGACCGGGATTTGTAGCCTTTAATTAGCCTGTAATTTAGCTGAATTACTCTAGTTGAGCATATATTAAGGTAATTAAATATGATTACGCAATGATTAATTAGATAAAGAGAGATCAGTCATAATGAGTTTTGTGGAATTGGGCAAATTATCACATTAGCTTAATGGCTTAGACTGGAGAATCAGGACAGTGGGATAAACAGACATCTAAAACGCTTCCCCTGAACAAACAATCCATCCGGTGGCACGATATACAAATGGACAGCACAAGCAGTGTGTTTCAAAACATGAATTCCCTAATCCCATCACAGAAAACCATCTTTATAATTCCTTCGTATCGAAACATAAATCACGGAACTCTGGAACGGCTCCACGGTCAATAGTGGGAACCTGCAGTGGCAGGACGTGACTGGATATAACCCTTAGGGCTTAAGTGGGGTTTTAGCTAGCAGGCTTCCTAGTCTGACTGCTGCTTTACCGCTTCCTATCTACGGAACAGGCACCTGGAGACAACCAGTACTCCTCAGTGAGAGATATGCCTCTCCTCCAATGGGCAttagctctcctgtaatactgtgtggtatAAGTGCACAGAATTGTCACAATCAAAGATGAGCGTGTCAAGCTTAAACTCTAGCGTTCTATAGATGTGGGATAGGCAATCAAAATTGGAGAGGGGAAGAAAATGTGTTCCATAAAATGGGGTTTAATAATTTTGAGGTTTTTGCTCATTTTAATGAAAAACATGAGTGGACATGAACATTGGAATGACGGGTAAAGCAATTAAAGTTGCAGTGAGAAACAGCATTGGATTTTCTGTAGTTGTTCAATTCCTTTCTTGAAAAATGTAAACACTAAAAGTTCATTAATAATTTTTCACTGAATGAATTGATTATTctgaaaaaataatatttaattggCTTCAGTGGGAATTCCTGCTCCTGTATTACTGAAagaacaagtaaaaaaaaaaaa

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00264	Tyrosinase	Common central domain of tyrosinase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002227	Domain	Tyrosinase copper-binding domain	Interproscan
IPR008922	Homologous_superfamily	Di-copper centre-containing domain superfamily	Interproscan
IPR050316	Family	Tyrosinase and Hemocyanin	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11474	TYROSINASE FAMILY MEMBER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0002052	Biological Process	positive regulation of neuroblast proliferation	Interproscan
GO:0004167	Molecular Function	dopachrome isomerase activity	Interproscan
GO:0006583	Biological Process	melanin biosynthetic process from tyrosine	Interproscan
GO:0016491	Molecular Function	oxidoreductase activity	Interproscan
GO:0021847	Biological Process	ventricular zone neuroblast division	Interproscan
GO:0042470	Cellular Component	melanosome	Interproscan
GO:0048066	Biological Process	developmental pigmentation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-