Gene detail

Detailed information of SKAU_T00243210 in Synaphobranchus kaupii Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
SKAU_T00243210	GDP-FUCOSE PROTEIN O-FUCOSYLTRANSFERASE 2	CM056383.1	71018515	71073167	+

Gene Structure

More details in Jbrowse Sequence

CDS

SKAU_T00243210

ATGGGAGCACGGCACAAGAAAGAGCTGGCAAGAGTGACCGCCTTCTTCATCCTGGAGCATGCTGGCCAAGAAAAACCAACAGGAACGATGGAGCCAGCGCTCGACGAGCCAGCGTTTCCCACACGCGTCTCCGCGGAGAACACTATTCCGGGCGAGCCTGGCGTGTTACGTGTTACGGCTTATTATGCCCGTGATGCGCTCGCCAAAAACCTGTACAGTCGTCTCTTCAGCTGGCTGGTTAACCGGATCAACGAGAGCATCAAGGCCCAAAGCAAAACGCGCAAGAAGGTCATGGGCGACAACAGCTTTGAGCAGTTCATCATCAACTACTGCAATGAGAAGCTCCAGCAGATCTTCATCGAGCTGACACTGCGAGAAGAACAGGAGGAGTACATCCGAgagGGTATTGAGTGGACCAACATTGATTATTTCAACAATGCTGTCATCTGCGACCTCATTGAgaatAACCAGAACGGGATACTGGCCATGCTGGACGAGGAGTGCCTCCGGCCGGGAACGGTGACCGACGACACCTTCCTGGACAAGCTGAACACCGTCTGCGCCGAGCACCCGCACTTCGAGAGCCGCCTCAGCAAGAACTCCAAGTTCCTGGCTGACCACAGCCTCCCCCACAGCTGCTTCCGCATCCAGCACTACGCCGGCAAGGTGCTGTACCGAGTGGAGGGTTTCGTGGATAAAAACAACGACCTGCTGTACCGGGACCTCTCCCAGGCCATGTACAAGGCCAACCACAGCCTGATGAAGCAACTCTTCCCCGAGGGAAACCCAACCAAGGTTAACCTGAAACGGCCGCCCACCGCTGGCTACCAGTTCAAGGCATCGGTTAGCACGCTCATGAAGAACCTCCAGACCAAGAACCCCAACTACATCAGGTGCATCAAGCCCAACGACAAGAAGGCGGCCCACATCTTCACGGATTCGCTGGTGTGCCACCAAGTGCGCTACCTGGGCCTAATGGAGAACGTACGGGTGCGGCGGGCCGGCTACGCCTTCCGGCAGGCCTACGAGCCCTGCCTGGAGCGCTACAAGATGCTCTGCAAACGGACCTGGCCCCACTGGAGGGGCCCTGCCAGGGAGGGAGTGGAGGTGTTGCTGAATGACCAGAAGGTCCCAGCTGAGGAGTTTGCATACGGACGCTCCAAGATCTTCATCAGGAACCCCAGAATGCTCTTCACCCTGGAGGAGAGGAGAAGGCAGTGTTTGCAGGACCTGGCCACCCTCATCCAGAAGATCTACCGCGGCTGGAAGTGCCGCACCCGCTTCCTGCTCATGAAGAAGAGCCAGGTCGTCGTGGCAGCCTGGTACCGTAGATACGCGCAACAAAAGAAATACCAGCAGATCAAGCGCTCCACCATCGTGATGCAGTCATTCACCAGGGGATGGAAGGCCCGAAAGATCCTCCGTGAGCTAAAATACCAGAAGAGGTGCAAGGAGGCAGTGACCACGATTGCGGCGTACTGGCACGGGACTCAGGCACGCAGGGAGCTGAGGCGgctgaaggaggaggccaggCGTAAGCACGCCGTCGCTGTCATTTGGGCCTACTGGTTGGGACTGAAgGTCCGTCGGGAGTACAGGAAGTTCTTCAGGGCTAATGCCGGCAAGAAGATCTACAACTTCACCATCCAGAGGATTATGCAGAAGTACTTCCTGAGCCTGAAAAAGACCATGCCCTCCATGTCGCCCATCGACAAAACCTGGCCCGTTCGGCCGTACGCTTTCTTGGACCAAGCCGATAAGGAGCTGAAGAGGATCTTCCATCTGTGGAGGTGCAAGAAATACAGAGGCCAGTTCACGGAGCAGAAGAAGGCCATCTATGAGGAGAAGCTGGAGGCCAGTGAGATCTTCAAGGGCAAGAAGGCCCTTTACCCCAGCAGAAAGGTTGAGATCCGGCTCTGTTTCCGCAGTGTCTCCCAGCCGTTCAAAGGGGACTACCTGGAGATTAACAAGAACCCCAAGTACCAGAAACTCAACAGCCTGGTGGAGGACAAGGTCCTCCTAGCAGATATGGTCAATAAGATCAACCGCGGCCAATGGCAAGGCAAGTCAACGGGAGCTCCTCGCATTTTCCTCCTGACCAAAAGCAACTTTTTCCTGGCCGACCAGAAGTCTGGTCAGATCAAGGCCAGCGTGCCACTGCCGGACCTGACCAGCGTGTCCGTGAGCACGCAAAGCGACGGCTTCTTCGCCCTCCGCCTTAAAGAGGGCACTGCTTCAGCAGCCAAGGGGGACTTCCTGTTGAGCAGCGATCGCCTGATCGAGATCATCACCAAGTTCCTTGTGCAGTTCAAACAGGATAAGGTGTGCGTCAAGTTCATCCCGGGGGGGCCCAAGAACGGAAACAGCGTCACCTGCAAACGCAAGAACAACCGCCTGCTGGAGGTGTCCGTTCCAGTTGTCCGAGGTCACATTCCTCCTCCTTGCGAGGTCTGCCTGCGGGGCCCTGTCCCTGGGGGAGCGGACTCTTTAACAGACTGTGCACTGCCATTAAAAATAGACCTCAATTACGGGCCGTCCTGCTACAAGTTCCCACCGTCCTGCCGGCTGGGAAACGAAGGAGGAGCCCCCCAAACTCCCGCGGACCCTAGGGGTGCTGATGTATTGTCCGAAGATAGTGCCTTCCGCGCCGGCCAGTCAGCGAGTTCCCCGGCCGCCACAGTCGCCCGAGACGTAAGGTACCTGCTGTATGATGTCAACCCGCCTGAAGGCTTCAACCTGCGGCGCGATGTGTACATCCGCATGGCGTCCCTGGTGAAGACGTTGCGCAAGCACGGTGACTGGGTGCTCGTGCTGCCTCCGTGGGGTCGTCTCTACCACTGGCAGAGCCCCGACATCCACCAGGTGCGCATCCCGTGGGGAGAATTCTTCAGCGTCAGCAGCCTCCACGCCAACGTGCCTGTGATCGAGTACGAGGAGTTTATCGCTGAGTCCGGCGGGCCCTTTGTGGACAGGGTTCTGGTGTTGCAGAACTATGCTGAGGGCTGGACAGACGGGAagtgggaggagaaggtggaggaACGGCCCTGTATTGAGCGGCTCATGTATTCCAGAGACAAGCAGGGCTACTACAGGGGCTGGTTCTGGGGTTACGAGGAAACGCGCGGACTGAACGTCACCTGCATGTCAGCCCAAGGCCACGCCTCCATCTTGGCCCCACTCCTGCTGCAAAACATCACATCGACGTCAGTAATGCTGGATAGAGCAGAGACCGTTCTCCATGATCACTATGCTGGAAAAGATTATTGGGATACTAGACGCAGCATGGTTTTTGCAAAACACCTGCGCATTATCGCGGACGAGTTCCGCGTCAAGTACCTGAACTCGTCCGACGAGACCGACGGGACGGCCTACAGCGAAGATTGGACACGCATGCAGGCTAAACTCGGTAGTGCGAAGGGTGGTCCGTACCTCGGGGTACACTTACGTCGACGGGACTTTATCTGGGGCCATCGAGAGGACGTGCCCAGCCTCAAAGGAGCGGTGAAGAAGATTCACAGCCTGATGAAGAAGCACAAGCTGGACAGAGTCTTTGTGGCTACTGATGCTAACGAGGAAGAACTGGAGGAGCTGAAGAGGATGTTGCCAGAGATGGTGCGGTTCGAGCCCACGTGGGAGGATCTGGAGCTGCTCAAAGATGGGGGCGTGGCCATCATCGACCAATGGATTTGCGTACATGCAAGGTATTTTATCGGTACGTCCTTGTCCACCTTCTCCTTCCGGATCCACGAGGAGAGGGAGATCCTGGGCTTTGACCCCAAGACCACCTACAACCGATTCTGTGGCGACAGCGAGAACGACTGTGAACAGCCCACCCACTGGAAAATCGTCTACTGA

Transcript

SKAU_T00243210

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00063	Myosin_head	Myosin head (motor domain)	Domain	Interproscan
PF00612	IQ	IQ calmodulin-binding motif	Motif	Interproscan
PF06017	Myosin_TH1	Unconventional myosin tail, actin- and lipid-binding	Domain	Interproscan
PF10250	O-FucT	GDP-fucose protein O-fucosyltransferase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000048	Binding_site	IQ motif, EF-hand binding site	Interproscan
IPR001609	Domain	Myosin head, motor domain	Interproscan
IPR010926	Domain	Class I myosin tail homology domain	Interproscan
IPR019378	Family	GDP-fucose protein O-fucosyltransferase	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR036961	Homologous_superfamily	Kinesin motor domain superfamily	Interproscan
IPR045130	Family	GDP-fucose protein O-fucosyltransferase 2-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13398	GDP-FUCOSE PROTEIN O-FUCOSYLTRANSFERASE 2	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003774	Molecular Function	cytoskeletal motor activity	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0016459	Cellular Component	myosin complex	Interproscan
GO:0036066	Biological Process	protein O-linked fucosylation	Interproscan
GO:0046922	Molecular Function	peptide-O-fucosyltransferase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-