Detailed information of SKAU_T00237060 in Synaphobranchus kaupii Gene info
Gene IDAnnotationChromosomeStartEndStrand
SKAU_T00237060MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATEDCM056383.14984508149975967-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00040fn2Fibronectin type II domainDomainInterproscan
PF00059Lectin_CLectin C-type domainDomainInterproscan
PF00270DEADDEAD/DEAH box helicaseDomainInterproscan
PF00271Helicase_CHelicase conserved C-terminal domainDomainInterproscan
PF11648RIG-I_C-RDC-terminal domain of RIG-IDomainInterproscan
PF16739CARD_2Caspase recruitment domainDomainInterproscan
PF18119RIG-I_CRIG-I receptor C-terminal domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000562DomainFibronectin type II domainInterproscan
IPR000772DomainRicin B, lectin domainInterproscan
IPR001304DomainC-type lectin-likeInterproscan
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR011029Homologous_superfamilyDeath-like domain superfamilyInterproscan
IPR011545DomainDEAD/DEAH box helicase domainInterproscan
IPR013806Homologous_superfamilyKringle-like foldInterproscan
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR016186Homologous_superfamilyC-type lectin-like/link domain superfamilyInterproscan
IPR016187Homologous_superfamilyC-type lectin foldInterproscan
IPR018378Conserved_siteC-type lectin, conserved siteInterproscan
IPR021673DomainRIG-I-like receptor, C-terminal regulatory domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR031964DomainCaspase recruitment domainInterproscan
IPR035992Homologous_superfamilyRicin B-like lectinsInterproscan
IPR036943Homologous_superfamilyFibronectin type II domain superfamilyInterproscan
IPR038557Homologous_superfamilyRIG-I-like receptor, C-terminal domain superfamilyInterproscan
IPR041204DomainRIG-I-like receptor, C-terminalInterproscan
IPR050111FamilyC-type lectin and snaclec domain-containing proteinInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR22803MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0038023Molecular Functionsignaling receptor activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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