Detailed information of SKAU_T00228250 in Synaphobranchus kaupii Gene info
Gene IDAnnotationChromosomeStartEndStrand
SKAU_T00228250SET DOMAIN PROTEINSCM056383.158296465844641+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|PHD

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00628PHDPHD-fingerDomainInterproscan
PF00855PWWPPWWP domainDomainInterproscan
PF00856SETSET domainFamilyInterproscan
PF17907AWSAWS domainDomainInterproscan
PF17982C5HCHNSD Cys-His rich domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000313DomainPWWP domainInterproscan
IPR001214DomainSET domainInterproscan
IPR001965DomainZinc finger, PHD-typeInterproscan
IPR003616DomainPost-SET domainInterproscan
IPR006560DomainAWS domainInterproscan
IPR011011Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR019786Conserved_siteZinc finger, PHD-type, conserved siteInterproscan
IPR019787DomainZinc finger, PHD-fingerInterproscan
IPR041306DomainNSD, Cys-His rich domainInterproscan
IPR046341Homologous_superfamilySET domain superfamilyInterproscan
IPR047426DomainHistone-lysine N-methyltransferase NSD1 / NSD2, first PHD fingerInterproscan
IPR047432DomainNuclear receptor-binding SET domain-containing protein 1, fifth PHD fingerInterproscan
IPR050777FamilySET2 Histone-Lysine N-MethyltransferaseInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR22884SET DOMAIN PROTEINSInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0042054Molecular Functionhistone methyltransferase activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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