Detailed information of SKAU_T00225770 in Synaphobranchus kaupii Gene info
Gene IDAnnotationChromosomeStartEndStrand
SKAU_T00225770MRNA EDITING ENZYMECM056382.17610891376113108+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08210APOBEC_NAPOBEC-like N-terminal domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR002125DomainCytidine and deoxycytidylate deaminase domainInterproscan
IPR013158DomainAPOBEC-like, N-terminalInterproscan
IPR016192Binding_siteAPOBEC/CMP deaminase, zinc-bindingInterproscan
IPR016193Homologous_superfamilyCytidine deaminase-likeInterproscan
IPR050610FamilyAPOBEC Cytidine DeaminaseInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR13857MRNA EDITING ENZYMEInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0004126Molecular Functioncytidine deaminase activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0016554Biological Processcytidine to uridine editingInterproscan
GO:0016787Molecular Functionhydrolase activityInterproscan
GO:0016814Molecular Functionhydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidinesInterproscan
GO:0080111Biological Processobsolete DNA demethylationInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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