Detailed information of SKAU_T00214380 in Synaphobranchus kaupii Gene info
Gene IDAnnotationChromosomeStartEndStrand
SKAU_T00214380WASH COMPLEX SUBUNIT 5CM056382.14139840141469159-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|U-box

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF10266StrumpellinHereditary spastic paraplegia protein strumpellinFamilyInterproscan
PF11789zf-NseZinc-finger of the MIZ type in Nse subunitDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000504DomainRNA recognition motif domainInterproscan
IPR004181DomainZinc finger, MIZ-typeInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR019393FamilyWASH complex, subunit strumpellinInterproscan
IPR034427DomainESRP1, RNA recognition motif 1Interproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR15691WASH COMPLEX SUBUNIT 5Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005768Cellular ComponentendosomeInterproscan
GO:0007032Biological Processendosome organizationInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0030041Biological Processactin filament polymerizationInterproscan
GO:0051125Biological Processregulation of actin nucleationInterproscan
GO:0071203Cellular ComponentWASH complexInterproscan
GO:0140285Biological Processendosome fissionInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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