Gene detail

Detailed information of SKAU_T00206570 in Synaphobranchus kaupii Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
SKAU_T00206570	SEGMENT POLARITY PROTEIN DISHEVELLED	CM056381.1	85307043	85334740	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

SKAU_T00206570

AGGTTTTATTCACACACATCGGCGCACAGCTGGTAGAGAAAGAGATCAGCGAGCGCTCCTCCGAGAATAACTTCAGCCTACTCCTGTTAAGTCATAAGGACAATTGACTGACTATTTGGCAGAATATTGTTGCATTTTTGGAAATATGGGCCGTATTTGATAGAGTGTATTGGTCTTATTCGCGTTCTTGGACGTTAAGAGAGTCGACTGTCTCCAGCGTAACCAGGGCAAAGGATTAACTCCCGACAGTCTTGTTTGAAGCGTTGAGCCGGCGCCGGGGAGGCAGCTAGAGCGACCCAGGGCTGGATGCGCTCGGCCTTCCTCTCCCCAGCGTCCCGCAATGGGGGAGACAAAAATCATCTACCACCTCGACGACCAAGAGACCCCGTACCTGGTCAAACTGCCCATCGCAGCGGATAGGGTCACTCTCGCGGACTTCAAAAATGTCCTCAATAAACCAAACTACAAGTTTTTCTTCAAATCTATGGACGATGACTTCGGggtggtGAAGGAGGAGATTTCGGATGACAATGCCAAACTGCCATGTTTCAACGGAAGAGTGGTGTCCTGGCGGGATGGCTCCCACTCAGACGGGGGCTCTGTGTGTGCGGACAGCCAGGTGGACCTGCCCCCACCTCTGGAGAGGACCGGAGGGATCGGAGACTCCAGACCCCCCTCCTTCCATGCGAATGCTGTTGGCAGTCAGGACAACCTGGACACAGAGACGGAGACGGAGTCAGTGGTCTCACtgcgcagggagagagagaaggagagagagaaggagaggccgCGCAGGAAAGACTCTCATGAACACGGTGGGAGGATGAATGGTCACTCGAGGCCGGAGCGACGGGCGGAGCCGGGCGGGTACGAGAGCGCCTCCACGGTGATGAGCAGCGAGCTGGAGTCCACCAGCTTCTTCGACTCTGAGGATGACGACTCCACCAGCCGGTTCAGCAGCTCCACGGAACAGGGCAGCTCTTCCCGCCTGATGAGGCGACATCGCCGTCGCCGACGGAAACCGAAGGCGTCGCGCATGGAGAGGTCGTCCTCGTTCAGCAGTATAACAGACTCCACCATGTCACTGAACATCATCACTGTCACTTTAAACATGGagaaGTATAACTTCCTGGGCATCAGTATAGTCGGGCAGAGTAATGAGAGGGGTGACGGGGGCATCTACATCGGCTCCATCATGAAGGGAGGAGCCGTGGCGGCTGACGGACGCATCGAGCCGGGAGACATGCTGCTGCAGGTGAACGACGTCAACTTTGAAAACATGACCAACGATGACGCCGTGCGGGTCTTGAGGGAGATCGTACACAAGCCAGgTCCCATCACCCTGACGGTGGCAAAGTGCTGGGATCCCAACCCTCGAGTTGTTTCACGTTGCCCCGGAGTGAGCCGATCCGGCCCATAGACCCTGCTGCGTGGGTATCCCACACTGCGGCCATGACGGGGGCGTACCCAGTGTACGGTATGAGCCCTTCCCTGAGCACCATCACCTCCACCAGCTCCTCCATCACCAGCTCCATCCCTGAGACCGAGAGGTTCGACGACTTCCACCTGTCCATCCACAGTGACATGGCAACCATTGCCAAGGCGATGGCTTCCCCAGAGTCAGGACTGGAGGTGCGAGATCGGATGTGGCTAAAGATCACCATCCCCAACGCCTTCATAgGGTCGGACGTGGTGGACTGGCTCTTTCATCACGTGGAAGGGTTCACGGACCGACGGGAAGCCCGCAAATACGCCAGCAACCTGCTCAAGGCCGGCTACATCCGCCACACACCGTCAACAAGATCACCTTCTCCGAGCAGTGCTACTACATCTTCGGAGACCTGCGCGGCAacatGGCTAATCTCTCCCTGCACGACCACGACGGCTCCAGTGGAGCCTCTGACCAGGACACCCTGGCCCCTCTGCCCCACCCTGGTGTGGCCCCGTGGCCCCTGGCTTTCCCCTACCAGtaccccatcccccacccctaCAACCCCAGCCCACAGAACCTGCATGATCCCTCTCACTGCTACCCCCGCGGGGGGAGGGAGTGCTGGCAGTCAGCACAGCGAAGGCAGCCGCAGCAGCGGCTCGAACCGCAGCGGGGGGGGGAAGAAGGAGGCGAAGGTGGGCGCCGCGGGCGCCGCGGGGGCCGAGTCCAAATCTGGGGGCAGCGGCAGCGAGACGGAGCAGAGACGAGAG

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00595	PDZ	PDZ domain	Domain	Interproscan
PF00778	DIX	DIX domain	Family	Interproscan
PF02377	Dishevelled	Dishevelled specific domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001158	Domain	DIX domain	Interproscan
IPR001478	Domain	PDZ domain	Interproscan
IPR003351	Domain	Dishevelled protein domain	Interproscan
IPR015506	Family	Dishevelled-related protein	Interproscan
IPR029071	Homologous_superfamily	Ubiquitin-like domain superfamily	Interproscan
IPR036034	Homologous_superfamily	PDZ superfamily	Interproscan
IPR038207	Homologous_superfamily	DIX domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10878	SEGMENT POLARITY PROTEIN DISHEVELLED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005109	Molecular Function	frizzled binding	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0016055	Biological Process	Wnt signaling pathway	Interproscan
GO:0060070	Biological Process	canonical Wnt signaling pathway	Interproscan
GO:0090179	Biological Process	obsolete planar cell polarity pathway involved in neural tube closure	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-