Detailed information of SKAU_T00203230 in Synaphobranchus kaupii Gene info
Gene IDAnnotationChromosomeStartEndStrand
SKAU_T00203230SARCOMA ANTIGEN NY-SAR-24/CYTOSKELETAL PROTEIN SOJOCM056381.17797710878049924-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|PHD

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00626GelsolinGelsolin repeatDomainInterproscan
PF00628PHDPHD-fingerDomainInterproscan
PF14061Mtf2_CPolycomb-like MTF2 factor 2DomainInterproscan
PF18104Tudor_2Jumonji domain-containing protein 2A Tudor domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001965DomainZinc finger, PHD-typeInterproscan
IPR002999DomainTudor domainInterproscan
IPR007122FamilyVillin/GelsolinInterproscan
IPR007123DomainGelsolin-like domainInterproscan
IPR011011Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR019786Conserved_siteZinc finger, PHD-type, conserved siteInterproscan
IPR019787DomainZinc finger, PHD-fingerInterproscan
IPR025894DomainPolycomb-like MTF2 factor 2, C-terminal domainInterproscan
IPR029006Homologous_superfamilyADF-H/Gelsolin-like domain superfamilyInterproscan
IPR040477DomainLysine-specific demethylase 4-like, Tudor domainInterproscan
IPR042014DomainMTF2, PHD domain 1Interproscan
IPR042015DomainMTF2, PHD domain 2Interproscan

PANTHER
PANTHER termDescriptionSource
PTHR18875SARCOMA ANTIGEN NY-SAR-24/CYTOSKELETAL PROTEIN SOJOInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0051015Molecular Functionactin filament bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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