| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| SKAU_T00201910 | TRANSCRIPTION INITIATION FACTOR IIB-RELATED | CM056381.1 | 74301719 | 74312677 | - |
| CDS | |||||
| SKAU_T00201910 | |||||
| Transcript |
| SKAU_T00201910 |
| Protein |
| SKAU_T00201910 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00382 | TFIIB | Transcription factor TFIIB repeat | Domain | Interproscan |
| PF08271 | TF_Zn_Ribbon | TFIIB zinc-binding | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000812 | Family | Transcription factor TFIIB | Interproscan |
| IPR013137 | Domain | Zinc finger, TFIIB-type | Interproscan |
| IPR013150 | Domain | Transcription factor TFIIB, cyclin-like domain | Interproscan |
| IPR013763 | Domain | Cyclin-like domain | Interproscan |
| IPR023486 | Conserved_site | Transcription factor TFIIB, conserved site | Interproscan |
| IPR036915 | Homologous_superfamily | Cyclin-like superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11618 | TRANSCRIPTION INITIATION FACTOR IIB-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000979 | Molecular Function | RNA polymerase II core promoter sequence-specific DNA binding | Interproscan |
| GO:0001174 | Biological Process | transcriptional start site selection at RNA polymerase II promoter | Interproscan |
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| GO:0006352 | Biological Process | DNA-templated transcription initiation | Interproscan |
| GO:0006367 | Biological Process | transcription initiation at RNA polymerase II promoter | Interproscan |
| GO:0006473 | Biological Process | protein acetylation | Interproscan |
| GO:0016251 | Molecular Function | RNA polymerase II general transcription initiation factor activity | Interproscan |
| GO:0016407 | Molecular Function | acetyltransferase activity | Interproscan |
| GO:0017025 | Molecular Function | TBP-class protein binding | Interproscan |
| GO:0051123 | Biological Process | RNA polymerase II preinitiation complex assembly | Interproscan |
| GO:0070897 | Biological Process | transcription preinitiation complex assembly | Interproscan |
| GO:0097550 | Cellular Component | transcription preinitiation complex | Interproscan |
| GO:1990114 | Biological Process | RNA polymerase II core complex assembly | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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