Detailed information of SKAU_T00192620 in Synaphobranchus kaupii Gene info
Gene IDAnnotationChromosomeStartEndStrand
SKAU_T00192620PRE-MRNA PROCESSING PROTEIN PRP39-RELATEDCM056381.13121865231242764+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyULD|UFD/UBQ|UBQ_Other
Ubiquitin FamilyULD|UFD/UBQ|UBQ_PIM

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00240ubiquitinUbiquitin familyDomainInterproscan
PF04758Ribosomal_S30Ribosomal protein S30FamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000626DomainUbiquitin-like domainInterproscan
IPR003107RepeatHAT (Half-A-TPR) repeatInterproscan
IPR006846FamilySmall ribosomal subunit protein eS30Interproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR019954Conserved_siteUbiquitin conserved siteInterproscan
IPR029071Homologous_superfamilyUbiquitin-like domain superfamilyInterproscan
IPR039415DomainUbiquitin-like protein FUBIInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR17204PRE-MRNA PROCESSING PROTEIN PRP39-RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000243Cellular Componentcommitment complexInterproscan
GO:0000395Biological ProcessmRNA 5'-splice site recognitionInterproscan
GO:0003735Molecular Functionstructural constituent of ribosomeInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005685Cellular ComponentU1 snRNPInterproscan
GO:0005840Cellular ComponentribosomeInterproscan
GO:0006396Biological ProcessRNA processingInterproscan
GO:0006412Biological ProcesstranslationInterproscan
GO:0030627Molecular Functionpre-mRNA 5'-splice site bindingInterproscan
GO:0071004Cellular ComponentU2-type prespliceosomeInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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