Detailed information of SKAU_T00189480 in Synaphobranchus kaupii Gene info
Gene IDAnnotationChromosomeStartEndStrand
SKAU_T00189480SOX TRANSCRIPTION FACTORCM056381.12033762220338716-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Transcription Factors FamilyHMG

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00505HMG_boxHMG (high mobility group) boxDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR009071DomainHigh mobility group box domainInterproscan
IPR017386FamilyTranscription factor SOX-12/11/4Interproscan
IPR036910Homologous_superfamilyHigh mobility group box domain superfamilyInterproscan
IPR050140FamilySRY-related HMG-box transcription factorsInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR10270SOX TRANSCRIPTION FACTORInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000122Biological Processnegative regulation of transcription by RNA polymerase IIInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0001228Molecular FunctionDNA-binding transcription activator activity, RNA polymerase II-specificInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0009653Biological Processanatomical structure morphogenesisInterproscan
GO:0030154Biological Processcell differentiationInterproscan
GO:0030182Biological Processneuron differentiationInterproscan
GO:0045944Biological Processpositive regulation of transcription by RNA polymerase IIInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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