Detailed information of SKAU_T00186340 in Synaphobranchus kaupii Gene info
Gene IDAnnotationChromosomeStartEndStrand
SKAU_T00186340VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VTA1 HOMOLOGCM056381.11159898211732123-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00029ConnexinConnexinDomainInterproscan
PF00354PentaxinPentaxin familyDomainInterproscan
PF00431CUBCUB domainDomainInterproscan
PF04652Vta1Vta1 likeFamilyInterproscan
PF18097Vta1_CVta1 C-terminal domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000859DomainCUB domainInterproscan
IPR001759FamilyPentraxin-relatedInterproscan
IPR013092DomainConnexin, N-terminalInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR019570DomainGap junction protein, cysteine-rich domainInterproscan
IPR023175Homologous_superfamilyVta1/Callose synthase, N-terminal domain superfamilyInterproscan
IPR035914Homologous_superfamilySpermadhesin, CUB domain superfamilyInterproscan
IPR038359Homologous_superfamilyConnexin, N-terminal domain superfamilyInterproscan
IPR039431DomainVta1/callose synthase, N-terminalInterproscan
IPR041212DomainVta1, C-terminalInterproscan
IPR044538FamilyVacuolar protein sorting-associated protein Vta1-likeInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR46009VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VTA1 HOMOLOGInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005771Cellular Componentmultivesicular bodyInterproscan
GO:0032511Biological Processlate endosome to vacuole transport via multivesicular body sorting pathwayInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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