Detailed information of SKAU_T00177000 in Synaphobranchus kaupii Gene info
Gene IDAnnotationChromosomeStartEndStrand
SKAU_T00177000E3 UBIQUITIN-PROTEIN LIGASE RAD18CM056380.19854334598572420-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|RING
Ubiquitin FamilyUBD|ZnF|UBZ

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02037SAPSAP domainDomainInterproscan
PF13923zf-C3HC4_2Zinc finger, C3HC4 type (RING finger)DomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001841DomainZinc finger, RING-typeInterproscan
IPR003034DomainSAP domainInterproscan
IPR006642DomainRad18, zinc finger UBZ4-typeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR039577FamilyE3 ubiquitin-protein ligase Rad18Interproscan

PANTHER
PANTHER termDescriptionSource
PTHR14134E3 UBIQUITIN-PROTEIN LIGASE RAD18Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003697Molecular Functionsingle-stranded DNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0006301Biological Processpostreplication repairInterproscan
GO:0006513Biological Processprotein monoubiquitinationInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan
GO:0097505Cellular ComponentRad6-Rad18 complexInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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