Gene detail

Detailed information of SKAU_T00176630 in Synaphobranchus kaupii Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
SKAU_T00176630	ADP-RIBOSYLATION FACTOR-LIKE PROTEIN 8	CM056380.1	97415185	97438825	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

SKAU_T00176630

atgggcaagaccaaagagctgtctaaggacgtcagggacaagattgtagacctgcacaaggctggaatgggctacaagaccatcggcaagcaacttggtgagaaggagacaactgttggtgcgattattcgaaaatggaagaaacacaaaatgaccatcaatcgccctctgtctggggctccacgcaagatctcgcctcgtggggtatcgatgatcatgagaaaggtgagggatcagcccagaactacacgggaggagcttgttaatgatctcaaggcagctgggaccacagtcaccaagaaaaccattgCGCTCATAAACCGGCTCTTGGACTGGTTCAGGTCCCTCTTTTGGAAGGAGGAGATGGAACTAACTCTGGTCGGACTTCAGTATTCTGGGAAGACCACCTTCGTCAACGTGATAGCtTCAGGCCAGTTCAGCGAGGACATGATCCCCACGGTGGGCTTCAACATGCGAAAGGTCACCAAGGGAAACGTAACCATAAAGATCTGGGACATAGGGGGCCAGCCGCGCTTCCGGAGCATGTGGGAGCGCTACTGTCGAGGAGTCAACGCCATCGTGTACATGGTGGATGCTGCAGATCGTGAAAAAATCGAGGCCTCCAGAAATGAACTACACAACCTTTTAGACAAACCTCAATTGCAAGGAATTCCTGTGCTAGTGCTTGGAAACAAGCGAGATCTTCCCAATGCATTGGATGAGAAGCAGCTTATTGAAAAAATGAACTTGGCGGCTATTCAGGACAGAGAGATCTGCTGCTACTCAATTTCCTGTAAAGAGAAGGACAACATAGATATCACACTGCAGTGGCTTATCCAGCACTCAAAGTCCCGGAGGAGCTGAGAGCAAAGCCCTGCCCTGTTCCTTCCCCCTGGCTCCGCCCCCCAGTCCCACTGGCCGTGCCATTCCCTCCCCGTCTCCCATTACTCACCCAGTGATGACATCATGCTCCCACCTGGCTGCGtggtctctctccccctctctctctctctctctctctctctctctcgtacctCAGTTCTCAGTTCCTCTCACACCTCATCCCCCACAGCCCTCACACACCCAGCTCACAGCATGTCCCACACCCTGCTAAAGATGTGGGCCTCCAGATACTCCCTGCTCCCTTACAGCTCTTGAAGGTCCCAGAGTTGTCACGGTACTGTCAACAGGGAATCAGGGTGCCCTCGGTCTGTCACAAGCTAAATTTCCGCCGCAGAAAAGATTGTTCTCAGTAGGGGCTATCGGTCCTGCACCCAGGTCCAAGGCGATCTCATGCCAGTTGGGCTGGGCGTGAGGTACGATTGGGCTTTTCCCTTTCTGGCCCTGTTGCCTTGAAACAGGAAACATTTCATGAATTGTTCCCCAGGGCCAATCCAATTCAAACACGTTGTGGGTGTGGTAAAACTGTCCCCAAACATTAACACACGCTCAGAAGGGGTAAAATAATTTGAAATGTTCAACAAACACTGGTTTTTACTGAAGTGAACTTGTTTATTATGAATGTAGACATTGTAAGCATGAATGTAGAATAACGGACATGAGGCGAAACTGCATAGGGTGAACCTGATTGGACGCAGAGTTTAAAGTGCCTTCTGCAAAAGCTTTGACCTGTGAAACGGTGTCGCAGTCCAGATGTACCTGGGCCATACGTACGGTGACAAAAGAAAACGCATTGAATTTATGGAAAATAAACTACGTATTCACGAGATGGTGAAAGgcacattttaattttattctaCTCTTTTTCCGTTCGCATGAACTCCTGCGGGCGGACAGCCTGTGTCTGTGGACATATTGTGACAACTCTGGAGATACCCCACTGTATTTAATGCACTTATGTAAATAAGCTGAACAGATGGAAATTGTGCGATTAAATGTTCACAGTGTGATGTATAAAGCACAAGCTACCCAGTGAATGAAGCGCTAGCGATGGATGCTATTGCTTAGCTTTCTTACCGGGGAATATGTATGAGGACTTATTGCCCTGAAGTTCACAACGCTATCTGCGCCTTtttagataaaaaaaaaaaagccagtggtTGGAATGCCAGTTAGTCAGTCACATAGTTAGTAAGTCTTAGCCataatcagtcagtctgtcagtctgtTGATCAGTGAGTCTGTCAGCCTCAAAGTTCGTAGGTCAGTCGGTGTCATGGTGAGCAAGTCCAGCCTGTGATCCTTCAGCTAGTTAGTCAGTCAGGCACTGGGTCACACAGCTCATGTAGCCCTGTTTACATCTCCACTGCCGGTCAGTCAGCCAGTTCTGCAGTCTGTGATGCCTCTAGGTCCGAGAGCTTGTGCGAAAGCTAGCCAAGTTGCGTTGCATGTTCCGCCGTAATGCCTTACCGAACTGCTCGCGCTCTTTAGAGTTACTGAGAGACGCTTGTGTTTGTCCTCAGCATCTCACTGGAATGGTCAACCTTTTAAACTGAGCTGGCCTCATTACACGGATTGCTTTAGATGAACCGATCTCTAATAGCCTTACACAGAGGACTGGTTTCATCTCTTCACTCTGTTCACTGTCACCATTTCTGCACCCAGTTTAGCAGCGCTTATTGTGTTTGTGCACAGTCAGTTAACAGACCTGTCCCCTCTCCATACACGGTACGACTCATTCAGGGAGAATCAGTCATTTTGTGTCTCGCACAGCGCAGTGCCCTTTGGACAGAATGACCGTTTTAAGTGTTTTCAGCGTCTCAAGTGGGAGTCTTTATTTGCCATTTCTTTAAAAAGAGGCTTATGCTGTTAGTTTTGGCCTGCCTGGGTGTTTACCTGGGGCCTAGAGATGAACCGATCACACAGACAGGCGATTGGAGGCGTGGTATCTCAGTGCCATTAGAACTGCAAATTACAATCATGCATACGGAAACAAAATGCTCAAGATGCAGGGAAATGGAAGTTTACAGAACGAAGACCTTTCCCTCGTGAAATGCATGAGACTGTCCAGGACAGTTGACCCTTTTTAATCATTCAGTGTGAGAGGTCATTTGGTTCACTTTATAAGCAGAGCATCAATATTGATATGCCTGATATGCATCCTCGTCCAGTACGCACACTTTTGCACAACATCTAATTAAACTACACTGAAGcgttactgaagcgattcagtttTAGTAGCGTTGAAGGAAACGACTGTAGGATCCCACCCTCACCAGGGATTTGAGCCTTTGTCCTTCTGGTTGAAAGTGAAGTTGTTTAAGTACCGTGTCCACATGCTGTCTGGGTTTGGCATTCGAGGAGGTTGAGGATGAGGAGGTGCGATGAAAAGGTCCGGGAGCTCAGGCTACCCCCTGCGCTCCAGGAACAGGTCAGATTAGCCACTGCTGTGGACCTGCTTCAAGGAGACCAGCCCCACAGTTGCACTGCTGCTGGAAAAGCTCTCTACTGAATTTAGCAGGTTTTTCTCTTCATCAGACGTACAGAAGCAGCTCTAGTTGGTTTGGAAtttttgttttaacttttttttaacattctgaATATATGTAAATATTTTCATTGTACTTGTAAAACTGGAAGTCGCAATGTTTATACAGATTGGGCTGTGATTGCCCACATTATGCCAGCTTTATGTCAGTCGCCCGGAGTACCATGCTTACTAACCATATCTTGTCGAATTCTGCTCTTAAATCTCGCAACATCGCTAATCCAGTTTCAATGGCGCGTAGTCACGATTATAGGCTTGCTGGGCATTTGCTGGACATCTTTTTAAAGCATATTTGGACTGACAGTTTGAGCCAATGACATGTATCCACACAGATGTGTGTTCTTATTGCCTGTGTATTTCCAGAGGCCCAGGTGGACGCCCTTGAGATCAGAATGACAGTATGGGCATAGAGCGCTACGGAGAGATGACGTGCTCAGATGTCACAGTCTCGCCCTTTATAACATGGGAACTCCGCTAAAAGCGCGCTTTATCATGTAAACGCTGAACTTTGGGGACTTTTCCTCCGTTCTCTGGTGCGCTCTAATGTGAGGCACCTCTCCTATGACTAGGCCTGGTGTCGCAGTGTTGTCATTGTGTGCTTAATGTGGGGACCAGGTGCCGTTGGAGAGTAACTGGGGCTGTGCGGGTAAAAGCTTGTGTATCTGGTGTTGAGCTACAGTACTTAACCACCCTCTGCATTTTACGGAAATCAGACActatgacaaaaaaaagaaagaaaaaaaatcgaGAGGTGCATTCTCCCCTGTGTGTTTGTAACTGCATGTGCAAAACCCAGATTCATTCACTTATAGACTTTGTAAATAagaaatgttaacatttttattCAGGTGAACGCTGCTGTCTGTGTTTCTTGCATTATTGTTTTTGTCTCTGCTTAATAAATTTTGGGTTTTTGag

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00025	Arf	ADP-ribosylation factor family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005225	Domain	Small GTP-binding protein domain	Interproscan
IPR006689	Family	Small GTPase superfamily, ARF/SAR type	Interproscan
IPR009057	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR036388	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan
IPR044154	Family	ADP-ribosylation factor-like protein 8A/8B	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45732	ADP-RIBOSYLATION FACTOR-LIKE PROTEIN 8	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003924	Molecular Function	GTPase activity	Interproscan
GO:0005525	Molecular Function	GTP binding	Interproscan
GO:0005765	Cellular Component	lysosomal membrane	Interproscan
GO:0008089	Biological Process	anterograde axonal transport	Interproscan
GO:0015031	Biological Process	protein transport	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-