Detailed information of SKAU_T00175720 in Synaphobranchus kaupii Gene info
Gene IDAnnotationChromosomeStartEndStrand
SKAU_T00175720NISCHARIN RELATEDCM056380.19455356894577837-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00787PXPX domainDomainInterproscan
PF12799LRR_4Leucine Rich repeats (2 copies)RepeatInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001611RepeatLeucine-rich repeatInterproscan
IPR001683DomainPhox homologyInterproscan
IPR003591RepeatLeucine-rich repeat, typical subtypeInterproscan
IPR025875RepeatLeucine rich repeat 4Interproscan
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR036871Homologous_superfamilyPX domain superfamilyInterproscan
IPR037904DomainNischarin, PX domainInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR15454NISCHARIN RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005178Molecular Functionintegrin bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0035091Molecular Functionphosphatidylinositol bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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TOP