Detailed information of SKAU_T00173560 in Synaphobranchus kaupii Gene info
Gene IDAnnotationChromosomeStartEndStrand
SKAU_T00173560TRANSCRIPTION FACTOR S-II ZINC FINGER DOMAIN-CONTAINING PROTEINCM056380.18682582186870224+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Transcription Factors FamilybHLH
Ubiquitin FamilyE3|E3 activity RING|PHD

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00010HLHHelix-loop-helix DNA-binding domainDomainInterproscan
PF00628PHDPHD-fingerDomainInterproscan
PF07500TFIIS_MTranscription factor S-II (TFIIS), central domainDomainInterproscan
PF07744SPOCSPOC domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001965DomainZinc finger, PHD-typeInterproscan
IPR003618DomainTranscription elongation factor S-II, central domainInterproscan
IPR011011Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR011598DomainMyc-type, basic helix-loop-helix (bHLH) domainInterproscan
IPR012921DomainSpen paralogue and orthologue SPOC, C-terminalInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR019786Conserved_siteZinc finger, PHD-type, conserved siteInterproscan
IPR019787DomainZinc finger, PHD-fingerInterproscan
IPR033082DomainDeath-inducer obliterator 1, PHD fingerInterproscan
IPR036575Homologous_superfamilyTranscription elongation factor S-II, central domain superfamilyInterproscan
IPR036638Homologous_superfamilyHelix-loop-helix DNA-binding domain superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR11477TRANSCRIPTION FACTOR S-II ZINC FINGER DOMAIN-CONTAINING PROTEINInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0006351Biological ProcessDNA-templated transcriptionInterproscan
GO:0046983Molecular Functionprotein dimerization activityInterproscan
GO:0097190Biological Processapoptotic signaling pathwayInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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