Gene detail

Detailed information of SKAU_T00165720 in Synaphobranchus kaupii Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
SKAU_T00165720	EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED	CM056380.1	59614978	59621614	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

SKAU_T00165720

TTATCCAAGGGAAATGCGGTTCCGTTTACTCGAAAACGAAACAAAAATATTGCACCTTAGATACGCTGTAGCTGTATTCATTGTGAGCTATCGACCGGAAGAACCAAACGGAAAATCCAAAACTGATCCAGAATATCCAAAACTGATCCAGAAGGGTGATCATTTTCAAATGATTTCAGTGACTCCGTTTATCTGAAAGAAGACACTGACCAAAacatttatataaaataaatcacagaaGATTACGAATAACCAAGTCTTTGGCAGAAAGTGACAGAGCACAAAGTACAGATGTCTTTGGGTGAGAGTACCAGAGATGGGGCAGTGGAGAACTTAGaggagaaaatatatatttttttaaggacAAAGGGAGGTGGATCCACGTTAAAGGCCTTAGAGATTGCTAAAGGTGTGGGACTGACAAAAGCCAAAGATGTTAACAAAGCCCTCTATGACTTAGAGAAGGCACATCGTCTACAGAAAGTAGGGGACAACCCACCGCTGTGGTCCCTAGTGGGGGATCGTGGGTCAGCTGAGGTGGATGAAGCACCCAGCCTCACTGTTACGCCTtcaaaacatgaaataaataaaattcttaGGTCACACACTGGGGGTGAAGGAGTTACAGCCAAGAAACTTGCCAGGGATTTGAACCAACCGAGCAAAGCTGTTAACGCCCAACTGTATGACATGCTTGAAAGAGGAGAGGTAGAAAAAATGAGCTTGTCTAGAAATGGTACCAACCTCTGGAAGTGCACTGATGAAGACCGAAGCAAAAATACTAAGAAAGAAGGAAGTGAAGCCCGAAATGATTCAATAACAGGGCGAATCGATGACAGCAATAGCAATGCAGCACTGACATCTCGTACAAGCGTCTCAAGgtTTTTTGAGGACTACAGTTCTGTAGAGAGGCTTGATGGAGGTGCCTTTGGAGATATTTATAAAGCAAGACAAAAGCTTGATAAGAAATATTATGCAATTAAGGTGGTAGACTATGAAGAGTATGCATTACGTGAAGTTGAAGCTTTGGCACATTTTCAGCATCCCAACATTGTGCGCTACTTCACAGCTTGGAGCGAGCCAAGTCCCCCACAACCCAGAGAGGTAACAGACGAAGAGGACGAATCAGAGTCATCAACTGTACACATCAAATCAAACAGTACTCCCAATAAGTACCTCTACATTCAAATGGAGTTCTGTGATGGGGGAACACTCACCAAGAGGATTAATGAGATGAATGCTGGGGAGAGGAGCAAAAAGGAGCCGCTGGTCATATTTCAGAAAATAGTGGACGGGGTGGACTACATTCATTCACAGGGACGCATTCACAGAGACTTGAAGCCAGATAACATACTGTTTGGGAGTGATGGTACAGTTAAGATTGGAGACTTTGGACTTGTGACAACAATAAAGAACGAGAATGGCGCTCCTGTTGAAAGGACCAAGCGAACTGGAACACCGACTTACATGAGCCCTGAACAGGAAAACCTGAGCACATATGAAGAAAAAGTGGATATTTTCGCCTTGGGCCTGATCTTTTTCGAACTCCTTTGGAGGATTAAAACTGGAATGGAACGAGTGATGCTTTGGAGGGATCTGAGGGATGGAAAGCTTCCAAGTGAGTTCTGTGTGCAGTACAAACCTGAGCATGGGCTCATCAGAAAGATGCTCTCTAAAGTTCCAGAAAAGAGACCAGGGACTAAAGACATTGACAAGCACCTCAACATCCTCCTGGGAAACCAGACCGAAGAGCTGAAAGAGAGGACTGTTTGAGAATTACTAAAGCCCTAACAGCCTTTCTAAAGACCTCACATATCTCTCAGTTTCCTTCTGTTGTTATGACCTATTCATGTTCAGCGAGATGAATGAAAACCACACGGTAAACCAGGGCTCTTTAACTGCTTTTGCATGGGGGCTTGGGTTTGTATCgttttaaacaggaaatattttgCATTACCTACATTTGCATGTgcaaataattttaattataaaTACAGAGCAGGTGTATGCTTATAAAAAAGAATTGCTGAAAAACATATTTTGGAGCTGTCAAGTAGTTTGTACTTCTATACAATAATTGGTTACAGCGTAGTCACATTCTCAGTGATTTTGTGTTGAATCAGATTGTCCCAGGGAAGGAGAGTTTTAATTGGCAGGGATGTCTCATCATGGAAGTCAACCTCTCCTGATTGGACACCTGTAGTCGGTGCCAGCTGATCATGAAATTGCAATTCACACTCCGAATCACTCAGAAGAATTAGCAACACAAGGGGCGAGGGGGACGGAAGTGTCTGCATAGATTATCAACAGTAATTATGCATGTGGATGTGTCATAGCCTGCTTAAGCCTAATTGCTTACATAAGAACAGCGATTCTTAAGCAAGGGGTCAAATCCTGCAGAGGGTGTCAAGCACATCTGTGAAGTAATTTCTTGTCAGTTTCGCTGTGAATTAACCACATTGGTGTCAGTCATACGAAGTCAAGAATAATATCACAATGAAATATTCCAAAAATGATTGaccatttttttacatttggagTACATGAATATTCATATGTGTAGCTAATCTACAATTATGATACTTGTATCTTGATGTGCTTTGCTGGGCAAAGAGAAATATCATTAAATAGGTATTCCTTTAATATGGCTTGTTGCTGCTCTGTTTATGTATATAAAAGATGAGAATACCATAGGAACATTATGTTTTAATTTTTATGATGTAAAATATGGGATAAAATTGGGCTTGGATTTGATTTAATTTTCTTAACATGTATTTGTTGAAtaagtaaaac

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00069	Pkinase	Protein kinase domain	Domain	Interproscan
PF02295	z-alpha	Adenosine deaminase z-alpha domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000719	Domain	Protein kinase domain	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR036388	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan
IPR036390	Homologous_superfamily	Winged helix DNA-binding domain superfamily	Interproscan
IPR042371	Domain	Z-binding domain	Interproscan
IPR050339	Family	Cell Cycle and Stress Response Kinase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11042	EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0003726	Molecular Function	double-stranded RNA adenosine deaminase activity	Interproscan
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0004694	Molecular Function	eukaryotic translation initiation factor 2alpha kinase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-