| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| SKAU_T00121880 | VHS DOMAIN CONTAINING PROTEIN FAMILY | CM056379.1 | 17432967 | 17446326 | + |
| CDS | |||||
| SKAU_T00121880 | |||||
| Transcript |
| SKAU_T00121880 |
| Protein |
| SKAU_T00121880 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | UBD|Alpha-Helix|GAT |
| Ubiquitin Family | UBD|Alpha-Helix|VHS |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00790 | VHS | VHS domain | Repeat | Interproscan |
| PF03127 | GAT | GAT domain | Domain | Interproscan |
| PF05806 | Noggin | Noggin | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR002014 | Domain | VHS domain | Interproscan |
| IPR004152 | Domain | GAT domain | Interproscan |
| IPR008942 | Homologous_superfamily | ENTH/VHS | Interproscan |
| IPR029034 | Homologous_superfamily | Cystine-knot cytokine | Interproscan |
| IPR038425 | Homologous_superfamily | GAT domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR13856 | VHS DOMAIN CONTAINING PROTEIN FAMILY | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005768 | Cellular Component | endosome | Interproscan |
| GO:0007165 | Biological Process | signal transduction | Interproscan |
| GO:0016020 | Cellular Component | membrane | Interproscan |
| GO:0030276 | Molecular Function | clathrin binding | Interproscan |
| GO:0035091 | Molecular Function | phosphatidylinositol binding | Interproscan |
| GO:0043130 | Molecular Function | ubiquitin binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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