Detailed information of SKAU_T00121610 in Synaphobranchus kaupii Gene info
Gene IDAnnotationChromosomeStartEndStrand
SKAU_T00121610TRINUCLEOTIDE REPEAT-CONTAINING GENE 6CM056379.11671176616743879-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00069PkinaseProtein kinase domainDomainInterproscan
PF16608TNRC6-PABC_bdgTNRC6-PABC binding domainDisorderedInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000719DomainProtein kinase domainInterproscan
IPR008271Active_siteSerine/threonine-protein kinase, active siteInterproscan
IPR011009Homologous_superfamilyProtein kinase-like domain superfamilyInterproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR017441Binding_siteProtein kinase, ATP binding siteInterproscan
IPR032226DomainTNRC6, PABC binding domainInterproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR052068FamilyGW182 domain-containing proteinInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR13020TRINUCLEOTIDE REPEAT-CONTAINING GENE 6Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000932Cellular ComponentP-bodyInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0004672Molecular Functionprotein kinase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005654Cellular ComponentnucleoplasmInterproscan
GO:0006468Biological Processprotein phosphorylationInterproscan
GO:0035195Biological ProcessmiRNA-mediated post-transcriptional gene silencingInterproscan
GO:0060213Biological Processpositive regulation of nuclear-transcribed mRNA poly(A) tail shorteningInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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