| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| SKAU_T00090840 | B-BOX DOMAIN CONTAINING | CM056378.1 | 43911129 | 43962292 | - |
| CDS | |||||
| SKAU_T00090840 | |||||
| Transcript |
| SKAU_T00090840 |
| Protein |
| SKAU_T00090840 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | E3|E3 activity RING|RING |
| Ubiquitin Family | E3|E3 activity RING|U-box |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00057 | Ldl_recept_a | Low-density lipoprotein receptor domain class A | Repeat | Interproscan |
| PF00431 | CUB | CUB domain | Domain | Interproscan |
| PF00622 | SPRY | SPRY domain | Family | Interproscan |
| PF00643 | zf-B_box | B-box zinc finger | Domain | Interproscan |
| PF01392 | Fz | Fz domain | Domain | Interproscan |
| PF13765 | PRY | SPRY-associated domain | Family | Interproscan |
| PF15227 | zf-C3HC4_4 | zinc finger of C3HC4-type, RING | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000315 | Domain | B-box-type zinc finger | Interproscan |
| IPR000859 | Domain | CUB domain | Interproscan |
| IPR001841 | Domain | Zinc finger, RING-type | Interproscan |
| IPR001870 | Domain | B30.2/SPRY domain | Interproscan |
| IPR002172 | Repeat | Low-density lipoprotein (LDL) receptor class A repeat | Interproscan |
| IPR003877 | Domain | SPRY domain | Interproscan |
| IPR003879 | Domain | Butyrophylin-like, SPRY domain | Interproscan |
| IPR006574 | Domain | SPRY-associated | Interproscan |
| IPR013083 | Homologous_superfamily | Zinc finger, RING/FYVE/PHD-type | Interproscan |
| IPR013320 | Homologous_superfamily | Concanavalin A-like lectin/glucanase domain superfamily | Interproscan |
| IPR017907 | Conserved_site | Zinc finger, RING-type, conserved site | Interproscan |
| IPR020067 | Domain | Frizzled domain | Interproscan |
| IPR023415 | Conserved_site | Low-density lipoprotein (LDL) receptor class A, conserved site | Interproscan |
| IPR035914 | Homologous_superfamily | Spermadhesin, CUB domain superfamily | Interproscan |
| IPR036055 | Homologous_superfamily | LDL receptor-like superfamily | Interproscan |
| IPR036790 | Homologous_superfamily | Frizzled cysteine-rich domain superfamily | Interproscan |
| IPR043136 | Homologous_superfamily | B30.2/SPRY domain superfamily | Interproscan |
| IPR043502 | Homologous_superfamily | DNA/RNA polymerase superfamily | Interproscan |
| IPR051051 | Family | E3 ubiquitin-protein ligase TRIM/RNF | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR25465 | B-BOX DOMAIN CONTAINING | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0008270 | Molecular Function | zinc ion binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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