Detailed information of SKAU_T00085890 in Synaphobranchus kaupii Gene info
Gene IDAnnotationChromosomeStartEndStrand
SKAU_T00085890NUCLEOLAR PRERIBOSOMAL-ASSOCIATED PROTEIN 1CM056378.12610924426132989+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05699Dimer_Tnp_hAThAT family C-terminal dimerisation regionDomainInterproscan
PF11707Npa1Ribosome 60S biogenesis N-terminalFamilyInterproscan
PF16201NopRA1Nucleolar pre-ribosomal-associated protein 1FamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR008906DomainHAT, C-terminal dimerisation domainInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR021714DomainNucleolar pre-ribosomal-associated protein 1, N-terminalInterproscan
IPR032436DomainNucleolar pre-ribosomal-associated protein 1, C-terminal domainInterproscan
IPR039844FamilyNucleolar pre-ribosomal-associated protein 1Interproscan

PANTHER
PANTHER termDescriptionSource
PTHR13500NUCLEOLAR PRERIBOSOMAL-ASSOCIATED PROTEIN 1Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000463Biological Processmaturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)Interproscan
GO:0000466Biological Processmaturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)Interproscan
GO:0005730Cellular ComponentnucleolusInterproscan
GO:0046983Molecular Functionprotein dimerization activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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TOP