Detailed information of SKAU_T00079570 in Synaphobranchus kaupii Gene info
Gene IDAnnotationChromosomeStartEndStrand
SKAU_T00079570PERIOD CIRCADIAN PROTEINCM056378.168285116896463-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00454PI3_PI4_kinasePhosphatidylinositol 3- and 4-kinaseFamilyInterproscan
PF00613PI3KaPhosphoinositide 3-kinase family, accessory domain (PIK domain)RepeatInterproscan
PF00792PI3K_C2Phosphoinositide 3-kinase C2DomainInterproscan
PF08447PAS_3PAS foldDomainInterproscan
PF12114Period_CPeriod protein 2/3C-terminal regionFamilyInterproscan
PF21353Per3-like_PAS-APeriod circadian protein homolog 3-like, PAS-A domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000014DomainPAS domainInterproscan
IPR000403DomainPhosphatidylinositol 3-/4-kinase, catalytic domainInterproscan
IPR001263DomainPhosphoinositide 3-kinase, accessory (PIK) domainInterproscan
IPR002420DomainC2 phosphatidylinositol 3-kinase-type domainInterproscan
IPR011009Homologous_superfamilyProtein kinase-like domain superfamilyInterproscan
IPR013655DomainPAS fold-3Interproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR018936Conserved_sitePhosphatidylinositol 3/4-kinase, conserved siteInterproscan
IPR022728DomainPeriod circadian-like, C-terminalInterproscan
IPR035892Homologous_superfamilyC2 domain superfamilyInterproscan
IPR035965Homologous_superfamilyPAS domain superfamilyInterproscan
IPR036940Homologous_superfamilyPhosphatidylinositol 3-/4-kinase, catalytic domain superfamilyInterproscan
IPR042236Homologous_superfamilyPhosphoinositide 3-kinase, accessory (PIK) domain superfamilyInterproscan
IPR048814DomainPeriod circadian protein homolog 1-3, PAS-A domainInterproscan
IPR050760FamilyPeriod circadian regulatorInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR11269PERIOD CIRCADIAN PROTEINInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000122Biological Processnegative regulation of transcription by RNA polymerase IIInterproscan
GO:0000976Molecular Functiontranscription cis-regulatory region bindingInterproscan
GO:0001222Molecular Functiontranscription corepressor bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0016301Molecular Functionkinase activityInterproscan
GO:0032922Biological Processcircadian regulation of gene expressionInterproscan
GO:0043153Biological Processentrainment of circadian clock by photoperiodInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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