Detailed information of SKAU_T00075220 in Synaphobranchus kaupii Gene info
Gene IDAnnotationChromosomeStartEndStrand
SKAU_T00075220B-BOX DOMAIN CONTAININGCM056377.1126131718126165226+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|RING
Ubiquitin FamilyE3|E3 activity RING|U-box

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00097zf-C3HC4Zinc finger, C3HC4 type (RING finger)DomainInterproscan
PF00643zf-B_boxB-box zinc fingerDomainInterproscan
PF15227zf-C3HC4_4zinc finger of C3HC4-type, RINGDomainInterproscan
PF18102DTCDeltex C-terminal domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000315DomainB-box-type zinc fingerInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR018957DomainZinc finger, C3HC4 RING-typeInterproscan
IPR039396DomainDeltex, C-terminalInterproscan
IPR039399Homologous_superfamilyDeltex, C-terminal domain superfamilyInterproscan
IPR051051FamilyE3 ubiquitin-protein ligase TRIM/RNFInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR25465B-BOX DOMAIN CONTAININGInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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