Detailed information of SKAU_T00064100 in Synaphobranchus kaupii Gene info
Gene IDAnnotationChromosomeStartEndStrand
SKAU_T00064100TETRATRICOPEPTIDE REPEAT PROTEIN 39 FAMILY MEMBERCM056377.18282351282914830-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00053Laminin_EGFLaminin EGF domainDomainInterproscan
PF02210Laminin_G_2Laminin G domainDomainInterproscan
PF06008Laminin_ILaminin Domain ICoiled-coilInterproscan
PF06009Laminin_IILaminin Domain IICoiled-coilInterproscan
PF10300Iml2-TPR_39Iml2/Tetratricopeptide repeat protein 39RepeatInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001791DomainLaminin G domainInterproscan
IPR002049DomainLaminin-type EGF domainInterproscan
IPR009254DomainLaminin alpha, domain IInterproscan
IPR010307DomainLaminin domain IIInterproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR019412FamilyInclusion body clearance protein Iml2/Tetratricopeptide repeat protein 39Interproscan

PANTHER
PANTHER termDescriptionSource
PTHR31859TETRATRICOPEPTIDE REPEAT PROTEIN 39 FAMILY MEMBERInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005102Molecular Functionsignaling receptor bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0007155Biological Processcell adhesionInterproscan
GO:0030155Biological Processregulation of cell adhesionInterproscan
GO:0030334Biological Processregulation of cell migrationInterproscan
GO:0032474Biological Processotolith morphogenesisInterproscan
GO:0045995Biological Processregulation of embryonic developmentInterproscan
GO:0060271Biological Processcilium assemblyInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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