Detailed information of SKAU_T00051680 in Synaphobranchus kaupii Gene info
Gene IDAnnotationChromosomeStartEndStrand
SKAU_T00051680STRAWBERRY NOTCH-RELATEDCM056377.13081573430905583+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00595PDZPDZ domainDomainInterproscan
PF00625Guanylate_kinGuanylate kinaseDomainInterproscan
PF07653SH3_2Variant SH3 domainDomainInterproscan
PF13871Helicase_C_4C-terminal domain on Strawberry notch homologueDomainInterproscan
PF13872AAA_34P-loop containing NTP hydrolase pore-1DomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001452DomainSH3 domainInterproscan
IPR001478DomainPDZ domainInterproscan
IPR008144DomainGuanylate kinase-like domainInterproscan
IPR008145DomainGuanylate kinase/L-type calcium channel beta subunitInterproscan
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR026741FamilyProtein strawberry notchInterproscan
IPR026937DomainStrawberry notch, helicase C domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR036028Homologous_superfamilySH3-like domain superfamilyInterproscan
IPR036034Homologous_superfamilyPDZ superfamilyInterproscan
IPR039187DomainStrawberry notch, AAA domainInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR12706STRAWBERRY NOTCH-RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0031490Molecular Functionchromatin DNA bindingInterproscan
GO:0042393Molecular Functionhistone bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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