Detailed information of SKAU_T00050490 in Synaphobranchus kaupii Gene info
Gene IDAnnotationChromosomeStartEndStrand
SKAU_T00050490CRUMBS FAMILY MEMBERCM056377.12794480028042261+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00008EGFEGF-like domainDomainInterproscan
PF00066NotchLNR domainDomainInterproscan
PF00701DHDPSDihydrodipicolinate synthetase familyDomainInterproscan
PF00957SynaptobrevinSynaptobrevinFamilyInterproscan
PF06816NODNOTCH proteinFamilyInterproscan
PF07645EGF_CACalcium-binding EGF domainDomainInterproscan
PF07684NODPNOTCH proteinFamilyInterproscan
PF12661hEGFHuman growth factor-like EGFDomainInterproscan
PF12796Ank_2Ankyrin repeats (3 copies)RepeatInterproscan
PF13774LonginRegulated-SNARE-like domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR000800DomainNotch domainInterproscan
IPR000867DomainInsulin-like growth factor-binding protein, IGFBPInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR002110RepeatAnkyrin repeatInterproscan
IPR002220FamilyDapA-likeInterproscan
IPR009030Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR010660DomainNotch, NOD domainInterproscan
IPR010908DomainLongin domainInterproscan
IPR011012Homologous_superfamilyLongin-like domain superfamilyInterproscan
IPR011656DomainNotch, NODP domainInterproscan
IPR013032Conserved_siteEGF-like, conserved siteInterproscan
IPR013785Homologous_superfamilyAldolase-type TIM barrelInterproscan
IPR017891Conserved_siteInsulin-like growth factor binding protein, N-terminal, Cys-rich conserved siteInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR022336FamilyNeurogenic locus notch homolog protein 2Interproscan
IPR024600DomainNotch, C-terminalInterproscan
IPR035993Homologous_superfamilyNotch-like domain superfamilyInterproscan
IPR036770Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR042855Domainv-SNARE, coiled-coil homology domainInterproscan
IPR049883DomainNOTCH1 EGF-like calcium-binding domainInterproscan
IPR051022FamilyNotch Signaling and Cell Fate DeterminationInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR24049CRUMBS FAMILY MEMBERInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005576Cellular Componentextracellular regionInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0006915Biological Processapoptotic processInterproscan
GO:0007219Biological ProcessNotch signaling pathwayInterproscan
GO:0007275Biological Processmulticellular organism developmentInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0016829Molecular Functionlyase activityInterproscan
GO:0030154Biological Processcell differentiationInterproscan
GO:0038023Molecular Functionsignaling receptor activityInterproscan
GO:0043235Cellular Componentreceptor complexInterproscan
GO:0071228Biological Processcellular response to tumor cellInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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