Detailed information of SKAU_T00042170 in Synaphobranchus kaupii Gene info
Gene IDAnnotationChromosomeStartEndStrand
SKAU_T00042170CRYPTOCHROMECM056377.154277715459808-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00186DHFR_1Dihydrofolate reductaseDomainInterproscan
PF00875DNA_photolyaseDNA photolyaseDomainInterproscan
PF03441FAD_binding_7FAD binding domain of DNA photolyaseDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001796DomainDihydrofolate reductase domainInterproscan
IPR002081FamilyCryptochrome/DNA photolyase class 1Interproscan
IPR005101DomainCryptochrome/DNA photolyase, FAD-binding domainInterproscan
IPR006050DomainDNA photolyase, N-terminalInterproscan
IPR014729Homologous_superfamilyRossmann-like alpha/beta/alpha sandwich foldInterproscan
IPR024072Homologous_superfamilyDihydrofolate reductase-like domain superfamilyInterproscan
IPR036134Homologous_superfamilyCryptochrome/DNA photolyase, FAD-binding domain-like superfamilyInterproscan
IPR036155Homologous_superfamilyCryptochrome/photolyase, N-terminal domain superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR11455CRYPTOCHROMEInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0004146Molecular Functiondihydrofolate reductase activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0032922Biological Processcircadian regulation of gene expressionInterproscan
GO:0043153Biological Processentrainment of circadian clock by photoperiodInterproscan
GO:0045892Biological Processnegative regulation of DNA-templated transcriptionInterproscan
GO:0046654Biological Processtetrahydrofolate biosynthetic processInterproscan
GO:0071949Molecular FunctionFAD bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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