Detailed information of SKAU_T00010050 in Synaphobranchus kaupii Gene info
Gene IDAnnotationChromosomeStartEndStrand
SKAU_T00010050HISTONE ACETYLTRANSFERASECM056376.12785810327879692+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|PHD

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00628PHDPHD-fingerDomainInterproscan
PF21524SAMD1_WHSAM domain-containing protein 1, WH domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001965DomainZinc finger, PHD-typeInterproscan
IPR005818DomainLinker histone H1/H5, domain H15Interproscan
IPR011011Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR019787DomainZinc finger, PHD-fingerInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR036390Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan
IPR048589DomainSAM domain-containing protein 1-like, WH domainInterproscan
IPR050603FamilyMYST family histone acetyltransferasesInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR10615HISTONE ACETYLTRANSFERASEInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000786Cellular ComponentnucleosomeInterproscan
GO:0000790Cellular ComponentchromatinInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003712Molecular Functiontranscription coregulator activityInterproscan
GO:0004402Molecular Functionhistone acetyltransferase activityInterproscan
GO:0006334Biological Processnucleosome assemblyInterproscan
GO:0045892Biological Processnegative regulation of DNA-templated transcriptionInterproscan
GO:0045944Biological Processpositive regulation of transcription by RNA polymerase IIInterproscan
GO:0070776Cellular ComponentMOZ/MORF histone acetyltransferase complexInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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