Detailed information of SKAU_T00009770 in Synaphobranchus kaupii Gene info
Gene IDAnnotationChromosomeStartEndStrand
SKAU_T00009770UBIQUITIN LIGASE PROTEIN CHFRCM056376.12696283026979556+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|RING

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00498FHAFHA domainFamilyInterproscan
PF13923zf-C3HC4_2Zinc finger, C3HC4 type (RING finger)DomainInterproscan
PF17979zf-CRDCysteine rich domain with multizinc binding regionsDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000253DomainForkhead-associated (FHA) domainInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR008984Homologous_superfamilySMAD/FHA domain superfamilyInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR040909DomainE3 ubiquitin-protein ligase CHFR, cysteine rich domain with multizinc bindingInterproscan
IPR052256FamilyE3 ubiquitin-protein ligase CHFRInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR16079UBIQUITIN LIGASE PROTEIN CHFRInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0004842Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006511Biological Processubiquitin-dependent protein catabolic processInterproscan
GO:0007093Biological Processmitotic cell cycle checkpoint signalingInterproscan
GO:0016567Biological Processprotein ubiquitinationInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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