Gene detail

Detailed information of SKAU_T00006380 in Synaphobranchus kaupii Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
SKAU_T00006380	MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM-17	CM056376.1	15467016	15472322	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

SKAU_T00006380

gtaaaagttctgccATGGGTTTCTTCCAACCAAGAACTCAgccggctgatttcactaattagttccacctcctggctgaagaatggtgctacttagcaaatccaggtgattggaataaaatactggggaggacttttactttctgaacctggattttacacctctgctataCAAAAGTAGTACACATTTATGAAACATAAAATCAGCTGAATTGTCATTGAAGCAAGATTAATTTAGACCAGCGAAGTTCAATTCATATTTGTTTTTCCTTAGTGGTTTACTTGTTGTAAGAAACATGCTGATAGCTGACCgttttgcttatttttttcttgaAACGAACGTTTTCGAGATTGCCGTCTTTGCTTTGGTTGGGTTGATTATGTTATAGGAATCTTATCCTTCACCGATAATACGCCAGCCTGGCAACCATGTTACGCACGTAGCTACGTCATCCTGTCGACTGCAGAAGAGGAAGAAAAATGGAGGAATATGCACGTGAACCATGTCCCTGGCGGATAGTAGATGACTGTGGGGGCGCCTTCACCATGGGAGCCATTGGAGGTGGGATCTTCCAGGCAGTCAAAGGCTTTCGAAATTCACCTGCTGGGATGAACCACAGGTTGCGAGGGAGTTTGACGGCCATAAAGAGCAGGGCCCCCCCAGTTGGGAGGCAGCTTTGCGGTGTGGGGGGGGGCTCTTCTCCATGATCGACTGCGGGCTGGTGAAAGTGAGGGAGAAGGAGGACCCCTGGAACTCCATCACCAGCGGAGCCATGACGGGGGCAATCCTGGCCGCAAGGAACGGGCCGGTTGCCATGGTGGGCTCTGCTGCAATGGGGGGGATACTGCTGGCGTTGATAGAGGGGGCTGGCATCCTGCTCACCAGGTTCGCCTCGTCCCAGTTCTCCACAGGGCCCCAGTTTGCAGATGAACCGGCGCCCATGCCAGCCCCCTCGTTTGGGGACTACAGGCAGTATCAGTGAGGGGACCCTCTCACTGCCTAGCTCTTTCCAACTCATGTCTCTTATTGAAGTAACACTGAAGGACTATGGCAAATGTACACAAGGACCATGTAGAGATGCAGGGAATTGCTCCAGTTTGTGGACAGGATGCCGGAGTTCACAAAGCGACATGCAGACTTTTCTTCTTCATTAGTTTATTTGAACAGTCAGCAGCCTCTGTACCATCCACATTGAGGCTTGTGTTTTTGCATGTGGTCCTCTCCTAACCACTCTGACCATGTTGGTGAAAGAGATGGTACAGGGTAGTGCCTGGTCAGGGTTCTGCTGATGCTGCTTGTAAATGTTACCAACGGTCTGTGTGCAATGTGCTCTGGATACCAGCTGTGGCTCGAACTATTGGAGTGCGTACCAAGAAGTAGGCTGCACTGACTAAGCACCCAAATCTGAAGGGGGTCACAAAAAGTGCACCTCCACTGCAGTCTAAGGGCCAGTTTGGGACCCGTGTTATAACTGTTGTATGTTCCTGCGTTTTCAGAAGTTTGTGTCGTCCGCTCGACTTTTTGCATTGCTTGTGCTTGTGGTGGCGGCTGTCAAAATGGCACATTGAGTACTatggtgttttttatttattggcatgactgagaGGGACCGTACAATATATCCCAAATACAGCTGAGTTTACAGCTCCTGATTTAGAAACCAACTTATTTActgatatataattttttaaatgacaaattTAGAAGTACCACACAATTAAGAAATGAACGGTGCTACCTGTAAGCAGAATCATACCTTTGGAAATCTATGGCTATATCAACTATTACAGCACATATTTTATTTAAGGGTTGTAATTACTAAGATCTGGATGCCTGTAAGAAAGACTGAAAAATATGAACatatttagtaaaatatagaAAATGGCATCATGTGgtttgtgttttttgtctgtttttactGTTGGGACTGGAATGCTTGTCCTTGTTCTTTTATATGTGGGCGTAGTGATTGTTCTCTGTATAAATCAGTTCAGTTGTGAAGAGTTA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02466	Tim17	Tim17/Tim22/Tim23/Pmp24 family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
-	-	-	-

PANTHER

PANTHER term	Description	Source
PTHR10485	MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM-17	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005744	Cellular Component	TIM23 mitochondrial import inner membrane translocase complex	Interproscan
GO:0008320	Molecular Function	protein transmembrane transporter activity	Interproscan
GO:0030150	Biological Process	protein import into mitochondrial matrix	Interproscan
GO:0031305	Cellular Component	obsolete integral component of mitochondrial inner membrane	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-