Gene detail

Detailed information of SKAU_T00003410 in Synaphobranchus kaupii Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
SKAU_T00003410	PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE	CM056376.1	6369974	6382795	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

SKAU_T00003410

GTCAGTGACATGAAAAGCAATATTTCCCGTAACGACGAGTTGACTGGTGCGAGTCGCTGGTTCCCGTACGCGGCAGTGTTGCTGCAGTGAGGTATGGGCAGACGAGGTTGAGGTTGCTGATGCTTAACGAGATAATTGCGAAGTCTAACCTACTACGTTCAACCAAATAAGATGACGAAAATGCTTTGAATTATCGGACTGCAAGATTGACTTGAAAGGAATCAGATGACAAGTTACCATGAGTCAGACTGAGACTGAGATGCCGGCGAATCGGCGTTCCCGCACGATGAAAAGGCGGCTGTGGGGGGGCCTGAGGCAGCAGTGGAAACTCTTGGGGCTGTTCGAGATTGACCAGCAGCATGAGTTCTACAGCCTGACCCAGATGATGAAGGAGGGCCTGTCAGCCGCCGTGCAGAACACCATCGACAACCCACCTTCCGATGAACTGTCTGAAGATGATTTCAAAATGGAAGTCACTCAAGTACATGAGggtTTCCAGATGCAGACATTTTCAGGTCCTGTGTTTTCTAGCCTTCGCCATTCCTTGGGGATGACGGAGAAGGAGTACCAGCACTCTCTCGCCTCTGAAGGGTGCTACCTGCAGTTCATCAGCAACTCTAAGAGCAAGGCTGACTTCTTCATCACGAATGACAAGAGATTCTTCATAAAGACACAGAACAAACGAGAAGTGAAATTCCTCCTGTCAAACCTGAAGATCTACTTGGAGCATCTGGAGAGCTATCCTCACTCTCTGCTGGTCAAGTTCCTGGGTGTCCACAAGATCAAAATTCCCCATCAAAAGAAGAAGTACTTCATTGTGATGCAGAGTGTGTTTTATCCTGATGACAGAATTAATGCAAGGTACGACATAAAGGGCTGTCAGGTGAGCAGGTGGACCAGCCCAGCCCCTGAGGGAAGCCATGTTATCGTGGTTCTGAAAGACATGAACTTTGAGGGACAGTACATCACACTGGATGATCAGGGTGCCTGGTTGGTTCGCCAAGTGGAAATCGACACGGCCTTCTTGCAGACGATCAACGTGCTGGACTACAGCCTACTGCTGGCTCATCAGCCCCTGCACAACGATGAGAGAGACCAGAGCCACAACTTGGCCACGCTCATCATGCGCACCAAGAACTCTGTGAATCCAGGGTCCAGTCCCAGCCATACGGGTCTTCCCTGCGTTCCAGGGGCGGTGCTCGAGGAGGACTCCGCCCTGCTGGTGTCGGAGATGGACCGTGGGTCAGACAGCGTCCGGGTCACAGAGACGCACTCCGGCGACGGACTAATCCCTCCACAGGAGCTTCAGGGCGGGGCCGCCAGGGCCGCTCCTGCAGACTCCGAGCTGCAGGAGTTCCAGGCCCAGAACCGGCGGCTACTGCCCAACTTCAAGAACCCCCTGCATGTAATCGATGGGCCGGACCTGCGCTATTTCGTGGGAATAATCGACATTTTTACTGTCTACGGCTTCAAAAAGAAGCTGGAGAACCTGTGGAAGAGACTGCGTTACCCTGGCCAGGCCTTCTCCACTGTTAGTCCCCCAGCCTACTGCCACAGGCTGTGCCAGTGGGTGCAGGATCACACCAAGTAGGCCCGAGACACGCCAAAGACTGTCCATGCAGACTATGCTAATGTTTGGGGCCATTAACAGATTGGCCACAGTCACCCAACTTGGCTTGCTGCTCATGTGCGAGCATGATGGTACCACTCTTGCCTTCCGAGTGTTTTTGTCCTTTCTTCCACATTTCTGCAccctccatttattaaaaagtaaCATGAAGCTTTTAGCCAGTTCCATCACTGTCCAAACCCTTTACCAGATGAtataatacagtgccctccactattataggcacccctggtaaagatgagtaaaaagggttataaaaaattcaccgtttggtgaattagcttaacagctaaatctagtcacaccccccaattcccacagagatccattcaaatgcagagacgttattgtatcgcttgtaagagtaccagaaaataagatttttgatggtgttgggtcacagacatcaggaagtcatggcatgcaaaggatatgagaccgaatattaaaaatgattactttattctatatatacactactgtgcaaaagtcttaggcacatgtgaaaatattctgtaaagcgaagatgctttcaagaataatgaaatgaaaagtttctaaatatcaaacaattgactataaaaaggagtaaacagtaaaaaactaaatcaaatcaatatttggtgtgaccaccctttgcctttaaaactgcatcagtcctcttaggtacactgatgtgcagttttataagaaaatcagctggtaggttgttccaagcatcttggagaacttgccacagttcttctgcagactttggctgtctcgcttgcttctgtctgtccaggtaatcccagacagcctcgatggtgtgcttgttcatcttttcgctgaagatagttcaattaaatttttggaaaatgaatgttttgaaatctttgtgtgtgtttttctactgacatactaatgcagaagacaaaaaataaacatctaagaaaaaaaaggaaaaaaattctagggtgcctaagacttttgcacagtactgtaaatgcaggggtgccaataattgtggcacatgtggttttgttaaaaagaattatttcttgatgagggatttttttttctcataataaatttacttcaattaaaggttggattcttcttattttgtcagtgtgagattaagctaattcaccaaacggtgaattttttataaccctttttactcatctttaccaggggtgccaataatagtggagggcactgcatatcaGAAGCAGAAGACAAGCCCTTTGCTTAATTTCACCATAGTTCCCAAATAGAACCACAAAACTATCTGAACAAGGTgctacagattatttaaaaaataatatatacagGTGTGTGATCCAAGACACATACGCCTCAATAttaaatgctgcagacagcttttgttagattattctGGAAGAACTTCCAGCATACAAAGTGAGCTAGGTTCTGTCTTGCTGAAGAGCAGGGTGGGGTCAGGTATAATTTTTCATGGCCTCCAAACCAGGCATTATCAGGTTATGCCTTTCATTGTTCGAATTAAACGACACATGAAGAGAAATATCACAATTTAAAAgtgaatgggttttttttttttcattaaatgtattttgacAGCTAAGTGACACATTTTTGCCTTTTTAGTCGAAGGTCCTGCAGGAATTTGAGTCAAACTAAGTGCTTTTCCATTATCTGTGAGCATAGAATACACTGCTTGTTCCTCTAGCCTGGCTGATTAATACAACAACATTATATTGATTATTATATTGATAACATTATATTGATTATCTGTATTGATACCCAGCGGTCTTGAATTGATTAGCAGCAAGGTGACAACAAAATAGGCATTGGAAAGCtcttttgaaaaatacattttggttGTCTCTGAAAATAGATTAATAACCATACGAGCATATTTACAATACATGGTCACCATGCATGACAcaacaaaaaaagctatttttgcaTGTATAATCCACTGGCTACAGAGCAACTGCATTCAACATGGCTTTATTCGTCAAACCAAACAGTaaacttgcatacacacacatcaaagaTCAGAGATGCTCAAAGATAAGAATAAATCCTAGAACCAAGTATGGCTTGAGATACAAGTCTAGATTTCTTGTTCAGAAAATACATTTTGGTTCGAATTTAACAAAATTCTCCTTGAAGagtgaaacaaaccctaaagttAATTTACGTGAGAAAGCGACCACTCTTTAATTAAATTAACTTTATCTAATTTATCTCTCTCATGGATTTCATATGAAAGCGTGTGTGTTGCTTGGTGTTAGAATTTTTAGAATTGAACAATGATGCTGTGTAGATGCACTGCCATCTGTGTTTATCAATGGTGGCATGTTGTATGGCAAACATTTTAATTACTTAAAAGGTCCCATatctaaatgctattttaaggtgcatgttttgtttttatctcaAAATGATTTTGCAATGTACTTTTGTGGCTGTTTTACAGTAAACTGTTTGAGGCAAATAACTCTTTACCCATGTATAAATAACTAGTCTGGAGGACTGTGTGGATTGCAATGATTGTATTTTCTTTTCATATAATGTGGTTGAGGCCTCTAGATGAATGAAAGCAATGATATAttgattgtttttatttaaacattgctcattgtatttatttacataGAAAACCCATGTACTGAAATCTTACTGGGACATTATGTATTGTGGACATATGACTGTTGTAAGCACTGATTAGTAAAAATCAATGAGCATACTATATTGTGACACAAGAACATATTTTAACTACAGTATATCCATCCACTGTTTTCCAATGCAGATGATGAAGTTTTGTGGTAGGAAGATAAGACTAAAACAAATCCTTGTTTACCATCCACACTCCTCCTTTCCCTTGTTCAGCTGGTACGTGCAGCCCCAGACTATCAGGAGAACTGGAAAATGGCCTGTGCCTTTTGTTTGGCAGGTTTTTGTTTATAACGGTATGTGCACAAATTAATGTTATGACATTGACAGAAATGATAGAGATGATAATACTAATAAACATCCTGAGTAATA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01504	PIP5K	Phosphatidylinositol-4-phosphate 5-Kinase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002498	Domain	Phosphatidylinositol-4-phosphate 4/5-kinase, core	Interproscan
IPR023610	Family	Phosphatidylinositol-4/5-phosphate 5/4-kinase	Interproscan
IPR027483	Homologous_superfamily	Phosphatidylinositol-4-phosphate 4/5-kinase, C-terminal domain superfamily	Interproscan
IPR027484	Homologous_superfamily	Phosphatidylinositol-4-phosphate 5-kinase, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23086	PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0016308	Molecular Function	1-phosphatidylinositol-4-phosphate 5-kinase activity	Interproscan
GO:0046488	Biological Process	phosphatidylinositol metabolic process	Interproscan
GO:0046854	Biological Process	phosphatidylinositol phosphate biosynthetic process	Interproscan
GO:0052742	Molecular Function	phosphatidylinositol kinase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-