Detailed information of SKAU_T00003270 in Synaphobranchus kaupii Gene info
Gene IDAnnotationChromosomeStartEndStrand
SKAU_T00003270SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEINCM056376.161920776230232+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|SH3

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00018SH3_1SH3 domainDomainInterproscan
PF00435SpectrinSpectrin repeatDomainInterproscan
PF07817GLE1GLE1-like proteinRepeatInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001452DomainSH3 domainInterproscan
IPR002017RepeatSpectrin repeatInterproscan
IPR012476FamilymRNA export factor GLE1-likeInterproscan
IPR018159RepeatSpectrin/alpha-actininInterproscan
IPR035825DomainAlpha Spectrin, SH3 domainInterproscan
IPR036028Homologous_superfamilySH3-like domain superfamilyInterproscan
IPR038506Homologous_superfamilyGLE1-like superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR11915SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEINInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005643Cellular Componentnuclear poreInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0016973Biological Processpoly(A)+ mRNA export from nucleusInterproscan
GO:0030036Biological Processactin cytoskeleton organizationInterproscan
GO:0030054Cellular Componentcell junctionInterproscan
GO:0030864Cellular Componentcortical actin cytoskeletonInterproscan
GO:0042995Cellular Componentcell projectionInterproscan
GO:0051015Molecular Functionactin filament bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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TOP