Gene detail

Detailed information of SKAU_T00001690 in Synaphobranchus kaupii Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
SKAU_T00001690	PLASMINOGEN-RELATED	CM056376.1	3088052	3096751	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

SKAU_T00001690

atgatgtTTTCGTTGCACTTTGTTTTGCTGAGTGTCGTATTTGTGGACTGTGCATCAAATATTGAAGAATGCACAAGAAGCAACGGAGTAAAGTACCGGGGAGAACAACAAATTACTTCTACCGGAAAGCGGTGCCTAAACTGGATGAATATAACCAGAGACTACAATGTATCAGCCTATACTGACGCAGAGACTGGCGTCGGGGACCACAGCTATTGCCGTAACCCAGATTCGGCTGACAAGCCATGGTGCTATGTAGTGGACCAGGAAGGCAAGGTTCAAAGGCAAGACTGTGCCATTGCCACTTGCAAAGACCAGGCGCCCACCGTAGTGGAGGCCCAGACATTCCCATCATCTTCCTCTTCAGGGAAGACCCAGATCTTTGAGCCAGCGAAGTCTGCCCCCGCGCAGAGTGAGGGCGCTGCTGTGCAGCCCATCGTCGGAATCAGCCAGAGGGTTCGAACCGgaccaaagaagaagaaggacCTTGGAACATTGGGCTACGTCCTGGGCATCCTCATGATGGCCGTCATCATCCTGCTGGGTGTGGGAATAACGCTCGGCTACTTCTACAAGAGGGGTCGGGACCTGAAGAAGCAGCACGATCAGCGGGTGTATGAGCGTGAGATGCAGAGGATCAACCTGCCCCTCTCGGCCTTCTCCAACCCCACCTGCGAGCTGGTGGACGAGAACACCGTCATCGTCAGCCCCCAGCAGACCCCCGTCGAGGATGCGGTTGAGGGCGGTGACCCCCTCATGGGCCAGGCCGGGACCCCAGGTGCCTGAGGGCCGAGGGGTGGGCCCCGGTGACGCGGGAAAAACCGacaaggaaaaacaaaacaaccatgGATCTCAAATGAGAGAAGCTGCCCCCCCAAACCCATCACCCCTTCTTTTATTAGCCTTCTGGAAAAGGAAATGGGACTAAAAAGGCTATGCTCTAAGGCAAACTTATTGTTCTCATTTCCCTAGTGTAAATGCTTGTCTAAATGGGGAGATGAACCAAAAGAAGGATTTCCTCAACATAGAGACCATCAGATGTGCAGAGACTGGACGACTTTTTGTACAAAAAGTGCATGTCAGGGATGTAAAATCATTTATTTTATGTTGGAACGCATCATTTATGGGTGACATGGGTTATGATTGTCCTTCTTAGCTGTATAGCTGTGTTTCAATCAACAGATCTAATGTAATCAAAAGGTAACAACACTGATCGTGGTACACACGGCTGACAGGGGGGGAAAAATCATAGCGCTTATTGTTATGCTTTTGTTTTCACTCAAGAGTGTGTCAGGATAATGTAGACAATGTCCTTTTCTGCTCTAGGAGGAATGGAGGGTTCCTCTTTCTCATTTATCCTGTTTCTGCCCAGTGGCAGGTCTGAGTGAATGGGAGGGGTTATATTAGCTCAGAGCATGACCTGCTAAAACATATGGGATTGTTGCGTTGGTAATTCCCCAAGTCGCTCTGTGCTTTGCATTGGAAGGGGGGTAGCGTTCCAGGAAATTGCAAGAGCAAGGGGAAACTAGAAAGGCCAGTTTTCAGAGGTTGGGATTGTCCAAATGCAAAACCCTCTTGTTCCTCCTTCGAGTCTCGAAAAAACATGTTGAAATTAGGGAGGGCCACGAGATTGACAGTTCCTCAAGGGGTTATGAAACTGCTCCTCTCTTGAACAGGCATGTTCTCAGTgtgctgcatttgaatgtattttcccCCCGAATTGTAATGGCCCTTTTGTGCTCAGGACATAATTCAGAAACCAACGCCGCATAGAGGCATCCCCCCAACCCAACCACGTGGCCCAACGTTAGACCAGAGGCTATGAGTTGGTTTCGTGGAAGTATAATCAGGGTGTTCTGGAATCAGTCACGTTCGTTTAACGGTGAGAAAAATCAGATTAGGCAGCAGAATGATGAGCCCTGAGCCAGTCCGTCGCCTGGTAGACATACCGCCACTCTGTATCTTCAGATTGGTTCGAGGAcactcccaaaaaaaaaacaagggaagGAGAACTGTAATGTGGTTACAGACTTATTGTAGCACAAAACGTCATTAGAATAATTCGATTATTCATCTGTAACTCAGGGGAAAGCAGATAGTTCCAAGGATGGAGAgagaaaagaggaaaaaatatTTGCAGGCATATCAAACCGTAACGATACGAAAGCCTGCTTTCCTGTCATTCGGCCACTTTGCATCTATACGAGCCCTACTTTTACCAGGACAAATTAATAAGATCAGAATTTTGTTTTATCAGTTGAAAAGCTTGAATTATAGGTAATAATAAATTATTGTTAGTTGGCTACCACTTGCTTTAAATGTTATGAAAGTAAAGTGTGccacaaaacattttttctgcTTTGTTGTGTTTAATTATCCAAAGATAGTTGTTGTACTATTACAATATCACAGTCAGCATATGCATAATACATATTTGTAGGAAAACCTTGTTATGGATGTCAGTTATCCAGTATCTATTTCTGTTCTGTGAACCTAATCTCAATCTTCACAAATCAGTagtcattatttttttattttgaaagctgAGGAGTTGAACTCTGTATACTGGATAATTATTAAATCATTGCAGTTTATTTGGTATGACTTGTATATTTTTTCTTACAATTAAGCTATAAGTActgttgctcttgtttaaaatTTAAAACAGTACTTGCATTTGTATATTTGGCAGTGTATACTGCTgtgactgaaataaaaaaaaaaatattttcaaaaatgttggAATTTTCTGGTCTCTTACAAGACATTTTCTGG

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00051	Kringle	Kringle domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000001	Domain	Kringle	Interproscan
IPR013806	Homologous_superfamily	Kringle-like fold	Interproscan
IPR018056	Conserved_site	Kringle, conserved site	Interproscan
IPR038178	Homologous_superfamily	Kringle superfamily	Interproscan
IPR050759	Family	Serine proteases and regulators with kringle domains	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24261	PLASMINOGEN-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004175	Molecular Function	endopeptidase activity	Interproscan
GO:0005102	Molecular Function	signaling receptor binding	Interproscan
GO:0005615	Cellular Component	extracellular space	Interproscan
GO:0014067	Biological Process	obsolete negative regulation of phosphatidylinositol 3-kinase signaling	Interproscan
GO:0036313	Molecular Function	phosphatidylinositol 3-kinase catalytic subunit binding	Interproscan
GO:0043553	Biological Process	obsolete negative regulation of phosphatidylinositol 3-kinase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-