Gene detail

Detailed information of SKAU_T00000910 in Synaphobranchus kaupii Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
SKAU_T00000910	S-ADENOSYLMETHIONINE SYNTHETASE	CM056376.1	1567290	1575645	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

SKAU_T00000910

TAGAGAGAGTAGTTACGTCAGATTTGTCTGGCGCAGTTGCATAAATACTGGTGCTGCAGCAATATTGCCGGTGTGTGTATTTTACAGAGGCAGAAGGTAGTCAGCCTGAAAACGCAAGCTACGTTTTCGCTGAGGCAAGAATAATTTGTTAGCTTCATACTGTCGAAAAGCAGGTACAAACGTTTAATCCTCGtattatattgtgaagataaataAACATGAACGGACAAATTAACGGGTTCCATAACTCACTCATCGAGGAAGACTGCTTTTTGTTCACATCGGAGTCTGTTGGAGAAGGACATCCAGATAAGATTTGCGACCAAATCAGCGATGCTGTGCTGGATGCCCATCTGAAGCAGGATCCTGATGCCAAAGTGGCATGTGAGACCGTTGCCAAGACGGGGATGATCCTGTTGGCAGGGGAGGTGACATCACGTGCCTGCGTGGACTACCAGAAGGTGGTACGCGAGACCATAAAACACATTGGTTATGACGACTCGTCTAAAGGCTTTGACTACAAGACCTGCAATGTGCTGGTGGCTCTTGAACAGCAGTCTCCGGACATTGCCCAGGGTGTGCACCTGGACCGCAGCGAGGAGGACGTCGGGGCTGGGGATCAgGGTCTCATGTTTGGCTATGCGACCGATGAGACGGAGGAGTGCATGCCCCTCACCATTGTCCTTGCCCACAAGCTCAATGCCAAGATGGCCGAACTGCGCCGCAATGGCACCCTGCCCTGGCTGAGGCCTGACTCCAAGACCCAGGTGACCGTGCAGTACCGCCAGGACCGCGGGGCCATGCTGCCCGTGCGCGTCCACACCATCGTCGTCTCCGTGCAGCACGACGAGGACATCTGCCTGGACGAGATGCGCGACGCGCTGAAGGAGAAGGTCGTCAAGGCTGTGGTGCCCTGCGTCTACCTGGACGACGACACCGTCTACCACCTGCAGCCCAGCGGGCGCTTCGTCATCGGCGGCCCTCAGGGCGACGCCGGCTTGACTGGTCGCAAGATCATTGTCGACACTTACGGCGGCTGGGGTGCCCATGGGGGCGGAGCCTTCTCTGGGAAGGATTACACCAAAGTGGACCGCTCTGCTGCGTATGCCGCCCGTTGGGTAGCCAAGTCCCTGGTCAAGGCAGAACTGTGCAAGCGGGTTCTAGTCCAGGTGTCGTACGCCATCGGAGTGTCCCACCCCTTGTCCATCTCCATATTCCACTACGGGACGTCCCCGCGGAGCGAGAGGGAGCTGCTGGACATCGTCAAGAAGAACTTTGACCTCCGACCCGGGGTCATCGTCAGGGATTTGGACCTGAAGAAACCAATTTATCAGAGGACCGCAGCTTACGGCCACTTTGGTCGTGATTCCTTCCCTTGGGAGGTGCCCAAAAAGCTGAAATACTAAACGTGtcaagctttttttcccccaggcCTGTTGGTGTATACTACAGAGAAGCCTACAAGGTTTTAGGGGGGGAAAAGGCGTCCAAAAAAAGATCCTACTTCCTAGTTGCTAAGTGATAGCCCCACCCCTCACTCTCTGAAAACCCTGTCTTcacaccccccccacctctccctctgcCACTTCCTCCCTCCAGAGCAGTCTGTGCTGTGCTGTCTTTGTCCACTTGCTTTGCCTACTTCCGGGTGTGTCTGGGACCATTGCAGGAGTTTCCCTGCAGTCCAGGGAGCTTTGTACCATCTGGGAATGTGCATCcgttcgtttttttttgttgatagttTTCAGACACATGATGTGTCATTTTCAACGAGCCAAATTTAGAAGCCGTTCGTTGTCATGGTACAAGGGCGTGCCCCCCTTATGTTTTAAGTGTACAATCTCATTTGGCTTCTTGTTGATGCCCCCCCCATCACCTCAAAGTACATTTTTTACATGTTGCTGTAAACGTCTACAACCTGCGGAAGAGATTGCTTCcatgcccccacccccacagcaGGGGTCTGCAAcattggtcctggagggccacaggctccgctggtttttgttgttgctcTGCACTTATAATCAATTTGAGCAGTATAGTTCACCTGGCTAATTGGGTGcagattttaaggtgaaaacaaaagccaGTCGAGCTTGTGGCTCTCCTGGACCTGGGTTGCTGAACCCTGCCCTATGCTAAGGCGGAATTGAATGATTTGGCTTGAGGGCCTAGTGGTTTGTAGCAGTTGGCACCGTCGTGCAGTGCTACTTGGTGCTTGATGGTAGCTTACTCGTATATGGACTGTGACTAAACCCGTTAAATTCAACCAGAGTTGAGATTGAATGCAACACCTTTATGGTGGTGGCGACCTAGAAAACTGCAGGGTCTCCATATTAAATTTTTTCATAGTTGCCTTGTTatttaaagcccccccccccccccccccaaattccacAATATTCCTTCTGTATGTTGCTGGAGGATGTATTGATGGCACAAGGATAAGTTATCTTTTGAAAATGGCTATGCATCGCAGGCTGAAATGCTTGCCAAACCATGGTTgcttaactttaaaaaaacaaaaacaaaattcccTTTCCTCCCTGCTCAGACCATTGCCGTTTTCTGACGTACTACAGAAAAGTCAGAAGCTGCTATCTCCTCTTCCCATCCCTATATGGTCTGTAGGGCTATCGGTAATACTTgactttatttataatttttttttttttttacattatgctgtGTTCCTTCGGTAAGACATTGAAATTCCATGTGCTACAAAACCTATTTTAAAGGTAattttgttttctgttcttgtttttttttttttttttttcttcccccccccTTTTCCTCCCACAAGGTTTTAAAAAGGGGTTAAGACAAAGGCACTCCCCATCTTTTGGTTCTGATGGCCGGTGTAGCTACAGAGAAACCTGCCTCTATCATTACCCTGAAGATGGGCTGTCTTAACCACAAATAAAACTCTTTGATACTTGAATACAAACGGAAATAAAGTATTCCTATTTATTGTGCTCTGAAACTCCGTGTGGATACAGAGAAGCTGGAGTTTCAGAAGgcagctttttttaaaaacaaaaaaaagcttaTTTTTTAAGTTACTGCTCGAATGCCATAATTGACAGTTTGTTTCCAGTGTTAGCCTGTGGTCCAAAGTGTCCTACAGAAAAGCTTTGGATTATAGCCACATGGGCTACTGTAGATGGTATTCTCAAGCGGCTACAGATTGGGTGAGATTGTATTGACCGTGCACATCCGTCGCCCATCGTTTTTCGCTCGCCTGCAATCAAGAGGGGCAAAGTTTGGTTGGTGTTGTACAGAGAAGCCGGCCTCGTTTACACGCTCCCTTGATTGTGGTGTACGCTTTTCTGATTTGGGATTTGTTTCCTTAGTCCAATTCAGAGATTGGTCAGTCGGTCTTCTGGTTACTGTAAAAGTGCCTTTCCAAATTCCCCTGCCCAATCCACCCCTCCTTCCCTTGCCAAACTGCTATTCTTTTTGCTCCTCTTTCCTCTCCCCTTACCTTCCTTCTTCCAGTCATGAAGAACAGGTAACTCATGTGTCTCCTCCGGTCCTAAACTTCCACACTTGAATACGAATCCTCATGTTAAAGATCTGAATAAAAATGTTGAATCCTAC

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00438	S-AdoMet_synt_N	S-adenosylmethionine synthetase, N-terminal domain	Domain	Interproscan
PF02772	S-AdoMet_synt_M	S-adenosylmethionine synthetase, central domain	Domain	Interproscan
PF02773	S-AdoMet_synt_C	S-adenosylmethionine synthetase, C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002133	Family	S-adenosylmethionine synthetase	Interproscan
IPR022628	Domain	S-adenosylmethionine synthetase, N-terminal	Interproscan
IPR022629	Domain	S-adenosylmethionine synthetase, central domain	Interproscan
IPR022630	Domain	S-adenosylmethionine synthetase, C-terminal	Interproscan
IPR022631	Conserved_site	S-adenosylmethionine synthetase, conserved site	Interproscan
IPR022636	Homologous_superfamily	S-adenosylmethionine synthetase superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11964	S-ADENOSYLMETHIONINE SYNTHETASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004478	Molecular Function	methionine adenosyltransferase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0006556	Biological Process	S-adenosylmethionine biosynthetic process	Interproscan
GO:0048269	Cellular Component	methionine adenosyltransferase complex	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-