Gene detail

Detailed information of SKAU_T00000220 in Synaphobranchus kaupii Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
SKAU_T00000220	HEXOKINASE	CM056376.1	410873	422807	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

SKAU_T00000220

tttagagcACCTGTGGGCTGAGTGGCTGTGGCAAGATGACAGGTGTGAGTGTTTTTAGAAGGTTGAGGTAAGGCCTGTACTTGGTTGCTATGGATACTGAAAAAGAAAACTATCAAGGAATAGTGAGGGAAAAGTATGGAAGCAGCAGAAAACATGCCGAAAAACAGCAGAAAACTCATCTAAGATGCCGCATAAAATGTAATACAATAAAAATCAGGGGGAAAAAACTTTTTTGACTTTTAAAGGAAGGAACAAAATACATTATTGGCGACAGAAAGCATATGAAGTTAATGGGGCATTATATGCCACGTATAACGTGTTCGTCGAAAATGAACAAAGCTACTTCTGCCCATTGCGCACCTGTTGCTGATGGCAGGTGATCTATTTTAGACTGTGCTCAGTGTGTCAATATCTAAGTTGCATGGTTAAAAACGTCAAGAATGGAGAAAACTATTCGCCTTCAGGGATTGTCATCATAGTGTTTGTCATATAGCAATTATACGAATCTACAAAGACACTGGAACGGTTACGCACTATATACAATGGATTATGTGAGCATTTATTTCAATGATGGGAAAATGGAGACGAGCTTCGTTATGAGAAGTTTGACCGTTTGCAGTATCTGGAGATCAATCTGATTATTGACTCGTTTTTAAAAGATTGAAAACAATGTGACGCTCCCGGGAAACGACTAAATGCAAACACTCACCAACCAAACGGCACTCATGACCGGCGGGATATGTATCATGGATCCTCGCAACACGGGGAAGGTGGAACAAATTCTATCGGAGTTCCTGCTGAAAAAAGAGGAACTCAAGGAGGTCATGAGGCGGATGCAACACGAAATGGATCGTGGGCTATGCCTGGAGACGCACGACAAGGCTAGCGTGAAGATGCTACCCACTTATGTGCGTTCAACCCCAGAGGGCTCTGAAGTGGGAGATTTCTTAGCCCTGGATCTGGGAGGGACCAATTTCCGGGTGATGCTGGTGAAGGTGGGAGCGGACGAGGAGAGGGGCTGGAAGGTGGAGACCAAGCACCAGATGTACTCCATCCCAGAGGATGCCATGACGGGCACAGCTGAAATGCTCTTTGACTACATTGCCGAATGCATCTCGGACTTCCTGACCAAGCACAGCCTTAAGCACAAGAAGCTTCCCCTCGGCTTCACCTTCTCCTTCCCAGTGCGCCATGAGGACATAGACAAGGGAATCCTGTTGAACTGGACCAAAGGCTTCAAGGCCTCTGGGGCCGAGGGAAACAACGTGGTGGGCTTGCTCAGGGACGCCATTAAAAGGAGAGGGGACTTTCAGATGGACATTGTTGCCATGGTAAATGACACAGTGGCCACCATGATCTCTTGCTACTATGAGGACCACAGCTGTGAAGTCGGGATGATTGTAGggacgGGCTGCAATGCCTGCTACATGGAGGAGATGCACACAGTGGAGCTGGTGGAGGGCAAGGAGGGGCGGATGTGTGTGAACACTGAATGGGGCGCTTTCGGTGACAACGGCGAGCTGGAGGAGTTCCGTCTGGAGTACGACCGATTGGTGGACGAGCTGTCACTCAATCCAGGCCAGCAGCTCTACGAGAAGCTCATCAGCGGGAAATACATGGGTGAGCTGGTGCGCCTGGTGCTGCTGAAGCTGGTCAATGAGGACCTGCTGTTCAACGGCGAGGCGTCCGACCTGCTGAAAACCAGGGGCAGCTTCGAGACATGCTTCGTGTCACAGGTGGAGAGTGACTCTGGGGACCGCAAACAGATCTACAACATTCTGACCACACTGGGTCTGCTGCCCTCTGAGCTGGACTGTGACCTTGTGCGTCTGGTCTGCGAGAGCGTGTCCACGCGGGCCGCCCACATGTGCGGAGCGGGGCTCGCCGGGGTCATCAACCACATGAGGGAGCGTCGCAGCCAGGAGGCGCTCAAGATCACCGTGGGCGTCGATGGCTCTGTCTACAAGCTGCACCCCTGCTTTAAAGAAAGATTCCACAAAATTGTTCGGGAGCTGACGCCTCATTGCGACATCACCTTTATCCAATCAGAGGAGGGGAGCGGACGGGGCGCAGCACTGATTTCCGCTGTAGCCTGCAAGATGGCAGCCTGCATGTTGGCCCAGTGAGGATGTCTTACAGCCTCCCACCTAGGAGAAGCGTCGGCACGTCTTGCTTAAGTGCTACGTAGAGGATCACATACATCGGCGATCCTTCCCAGCTCTCAAGCCGTTTGCCATTTAATTCCAAGACTCGTTGGGCTCTGCATGAAGAGGAATCGCGCTTGTCAGTGAAGACGAAGAAGTATCAGTAAAACATTAGCAGTGCTTTCAAACATGTTAAGAAACTAGAGTTCATTAATAATTCAGCACTTTTTTCTGTTAACTTCATCACTGCAAGTATGTTATTGTTAAAACAAATTTTGAGGGTATGCCCTATCCAGGAGTCCACAATACAAAAGCATGTTTGACGATAGTGTTTGAATTGCACGGCAGCCACTGTAGTGTTCAGATAATATAGCTGGTGATGAAACATTTTGACACCTGTGTGTTCAACAGCCCGTTTATTAAGCGCAGGTGTGAACTGTGTCTAACGTGGATGCTAGCTGTGTTATGGACTTGAACATGGTTTTACTGTGCTAAGCCATAATGTGAAGAGGGATGGAAACTTAGGAGTATTTTGGAGAGGATTGTACATTTAGGAGAtagtattttgtttatttttgttgtttcttGGATTGGAACAACACTTCGGATTTTAAAATTGTAAGGtcagaatggggaaaaatgtgaCACCAAAGCTATGGCTTAGTAACATGTGAATTAGCTATTACTTTATTCAGCTAGGTGTTTTCCTTTCCCAATACCTATGTCACTTACATCGATGTAAGCGTAATACCCACTCCTTGGCCCTGTACCCTTGATGGGGAATCATTTTCATGGGCATCTGTCTTATCTATCATTGAAACCATTTATTTAAACATGTATACGCATTTTCAAGATATGTAACAGTATTTAGCAGCATGTTATTTTGAATGTGCTTTGTACATgtgagaaatgggggggggggg

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00349	Hexokinase_1	Hexokinase	Domain	Interproscan
PF03727	Hexokinase_2	Hexokinase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001312	Family	Hexokinase	Interproscan
IPR019807	Binding_site	Hexokinase, binding site	Interproscan
IPR022672	Domain	Hexokinase, N-terminal	Interproscan
IPR022673	Domain	Hexokinase, C-terminal	Interproscan
IPR043129	Homologous_superfamily	ATPase, nucleotide binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19443	HEXOKINASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0001678	Biological Process	intracellular glucose homeostasis	Interproscan
GO:0004340	Molecular Function	glucokinase activity	Interproscan
GO:0004396	Molecular Function	hexokinase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0005536	Molecular Function	D-glucose binding	Interproscan
GO:0005739	Cellular Component	mitochondrion	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0005975	Biological Process	carbohydrate metabolic process	Interproscan
GO:0006006	Biological Process	glucose metabolic process	Interproscan
GO:0006096	Biological Process	glycolytic process	Interproscan
GO:0008865	Molecular Function	fructokinase activity	Interproscan
GO:0016773	Molecular Function	phosphotransferase activity, alcohol group as acceptor	Interproscan
GO:0019158	Molecular Function	mannokinase activity	Interproscan
GO:0046835	Biological Process	carbohydrate phosphorylation	Interproscan
GO:0050796	Biological Process	regulation of insulin secretion	Interproscan
GO:0051156	Biological Process	glucose 6-phosphate metabolic process	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-