Detailed information of RPACG26707.1 in Riftia pachyptila Gene info
Gene IDAnnotationContigStartEndStrand
RPACG26707.1SEMINAL PLASMA PROTEINtig0011794111227921123588-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00040fn2Fibronectin type II domainDomainInterproscan
PF00090TSP_1Thrombospondin type 1 domainDomainInterproscan
PF00704Glyco_hydro_18Glycosyl hydrolases family 18DomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000562DomainFibronectin type II domainInterproscan
IPR000884RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR001223DomainGlycoside hydrolase family 18, catalytic domainInterproscan
IPR013806Homologous_superfamilyKringle-like foldInterproscan
IPR017853Homologous_superfamilyGlycoside hydrolase superfamilyInterproscan
IPR036383Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR036943Homologous_superfamilyFibronectin type II domain superfamilyInterproscan
IPR051666FamilySeminal Plasma Capacitation RegulatorInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR22918SEMINAL PLASMA PROTEINInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005975Biological Processcarbohydrate metabolic processInterproscan
GO:0008201Molecular Functionheparin bindingInterproscan
GO:0009986Cellular Componentcell surfaceInterproscan
GO:0048240Biological Processsperm capacitationInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for RPACG26707.1 global RNA-seq network
TOP