Detailed information of RPACG26697.1 in Riftia pachyptila Gene info
Gene IDAnnotationContigStartEndStrand
RPACG26697.1TATA-BINDING PROTEIN-ASSOCIATED FACTOR 172tig0011794110457931062098-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00176SNF2-rel_domSNF2-related domainDomainInterproscan
PF00271Helicase_CHelicase conserved C-terminal domainDomainInterproscan
PF02985HEATHEAT repeatRepeatInterproscan
PF12054DUF3535Domain of unknown function (DUF3535)FamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000330DomainSNF2, N-terminalInterproscan
IPR000357RepeatHEAT repeatInterproscan
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR011989Homologous_superfamilyArmadillo-like helicalInterproscan
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR022707DomainMot1, central domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR038718Homologous_superfamilySNF2-like, N-terminal domain superfamilyInterproscan
IPR044078DomainMot1, ATP-binding domainInterproscan
IPR044972FamilyTATA-binding protein-associated factor Mot1Interproscan
IPR049730DomainSNF2/RAD5-like, C-terminal helicase domainInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR36498TATA-BINDING PROTEIN-ASSOCIATED FACTOR 172Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0017025Molecular FunctionTBP-class protein bindingInterproscan
GO:0140658Molecular FunctionATP-dependent chromatin remodeler activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for RPACG26697.1 global RNA-seq network
TOP