Detailed information of RPACG26690.1 in Riftia pachyptila Gene info
Gene IDAnnotationContigStartEndStrand
RPACG26690.1MATRIX PROTEIN, PUTATIVE-RELATEDtig00117941937710947960-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00093VWCvon Willebrand factor type C domainDomainInterproscan
PF03160Calx-betaCalx-beta domainDomainInterproscan
PF16184Cadherin_3Cadherin-likeDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001007DomainVWFC domainInterproscan
IPR003644DomainNa-Ca exchanger/integrin-beta4Interproscan
IPR006212RepeatFurin-like repeatInterproscan
IPR009030Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR038081Homologous_superfamilyCalX-like domain superfamilyInterproscan
IPR039005RepeatCSPG repeatInterproscan
IPR051561FamilyFRAS1-related extracellular matrixInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR45739MATRIX PROTEIN, PUTATIVE-RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0007154Biological Processcell communicationInterproscan
GO:0009653Biological Processanatomical structure morphogenesisInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0062023Cellular Componentcollagen-containing extracellular matrixInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for RPACG26690.1 global RNA-seq network
TOP