Detailed information of RPACG26676.1 in Riftia pachyptila Gene info
Gene IDAnnotationContigStartEndStrand
RPACG26676.1RIBOSOME BIOGENESIS PROTEINtig00117941562645574735-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04950RIBIOP_C40S ribosome biogenesis protein Tsr1 and BMS1 C-terminalFamilyInterproscan
PF08142AARP2CNAARP2CN (NUC121) domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR007034DomainRibosome biogenesis protein BMS1/TSR1, C-terminalInterproscan
IPR012948DomainAARP2CNInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR030387DomainBms1/Tsr1-type G domainInterproscan
IPR037875DomainRibosome biogenesis protein Bms1, N-terminalInterproscan
IPR039761FamilyRibosome biogenesis protein Bms1/Tsr1Interproscan

PANTHER
PANTHER termDescriptionSource
PTHR12858RIBOSOME BIOGENESIS PROTEINInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000462Biological Processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)Interproscan
GO:0000479Biological Processendonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)Interproscan
GO:0003924Molecular FunctionGTPase activityInterproscan
GO:0005525Molecular FunctionGTP bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0030686Cellular Component90S preribosomeInterproscan
GO:0034511Molecular FunctionU3 snoRNA bindingInterproscan
GO:0042254Biological Processribosome biogenesisInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for RPACG26676.1 global RNA-seq network
TOP