Detailed information of RPACG26626.1 in Riftia pachyptila Gene info
Gene IDAnnotationContigStartEndStrand
RPACG26626.1ATAXIA TELANGIECTASIA MUTATED ATM -RELATEDtig00117938626501636966-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00454PI3_PI4_kinasePhosphatidylinositol 3- and 4-kinaseFamilyInterproscan
PF02260FATCFATC domainFamilyInterproscan
PF15785SMG1Serine/threonine-protein kinase smg-1FamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000403DomainPhosphatidylinositol 3-/4-kinase, catalytic domainInterproscan
IPR003152DomainFATC domainInterproscan
IPR011009Homologous_superfamilyProtein kinase-like domain superfamilyInterproscan
IPR014009DomainPIK-related kinaseInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR018936Conserved_sitePhosphatidylinositol 3/4-kinase, conserved siteInterproscan
IPR031559FamilySerine/threonine-protein kinase SMG1Interproscan
IPR036940Homologous_superfamilyPhosphatidylinositol 3-/4-kinase, catalytic domain superfamilyInterproscan
IPR039414DomainSMG1, PIKK catalytic domainInterproscan
IPR050517FamilyDNA Damage Response and Repair KinaseInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR11139ATAXIA TELANGIECTASIA MUTATED ATM -RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000184Biological Processnuclear-transcribed mRNA catabolic process, nonsense-mediated decayInterproscan
GO:0004674Molecular Functionprotein serine/threonine kinase activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006468Biological Processprotein phosphorylationInterproscan
GO:0016301Molecular Functionkinase activityInterproscan
GO:0016310Biological ProcessphosphorylationInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for RPACG26626.1 global RNA-seq network
TOP