| Gene ID | Annotation | Contig | Start | End | Strand |
|---|---|---|---|---|---|
| RPACG26544.1 | HEPATOCELLULAR CARCINOMA-ASSOCIATED ANTIGEN 66 | tig00117917 | 319476 | 349829 | + |
| CDS | |||||
| RPACG26544.1 | |||||
| Transcript |
| RPACG26544.1 |
| Protein |
| RPACG26544.1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF08640 | U3_assoc_6 | U3 small nucleolar RNA-associated protein 6 | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR003107 | Repeat | HAT (Half-A-TPR) repeat | Interproscan |
| IPR011990 | Homologous_superfamily | Tetratricopeptide-like helical domain superfamily | Interproscan |
| IPR013949 | Family | U3 small nucleolar RNA-associated protein 6 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR23271 | HEPATOCELLULAR CARCINOMA-ASSOCIATED ANTIGEN 66 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000462 | Biological Process | maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | Interproscan |
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0006396 | Biological Process | RNA processing | Interproscan |
| GO:0030515 | Molecular Function | snoRNA binding | Interproscan |
| GO:0032040 | Cellular Component | small-subunit processome | Interproscan |
| GO:0034388 | Cellular Component | Pwp2p-containing subcomplex of 90S preribosome | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
| 1. Expression trend for RPACG26544.1 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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