Detailed information of RPACG26228.1 in Riftia pachyptila Gene info
Gene IDAnnotationContigStartEndStrand
RPACG26228.1CDK-ACTIVATING KINASE ASSEMBLY FACTOR MAT1tig00117374286130286477+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF06391MAT1CDK-activating kinase assembly factor MAT1FamilyInterproscan
PF17121zf-C3HC4_5Zinc finger, C3HC4 type (RING finger)DomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001841DomainZinc finger, RING-typeInterproscan
IPR004575FamilyCdk-activating kinase assembly factor MAT1/Tfb3Interproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR015877DomainCdk-activating kinase assembly factor MAT1, centreInterproscan
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR12683CDK-ACTIVATING KINASE ASSEMBLY FACTOR MAT1Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000079Biological Processregulation of cyclin-dependent protein serine/threonine kinase activityInterproscan
GO:0005675Cellular Componenttranscription factor TFIIH holo complexInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0006289Biological Processnucleotide-excision repairInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0045737Biological Processpositive regulation of cyclin-dependent protein serine/threonine kinase activityInterproscan
GO:0061575Molecular Functioncyclin-dependent protein serine/threonine kinase activator activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for RPACG26228.1 global RNA-seq network
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