Detailed information of RPACG26108.1 in Riftia pachyptila Gene info
Gene IDAnnotationContigStartEndStrand
RPACG26108.1SYNAPTIC VESICLE GLYCOPROTEIN 2tig00117223484698534898-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00083Sugar_trSugar (and other) transporterFamilyInterproscan
PF13599Pentapeptide_4Pentapeptide repeats (9 copies)RepeatInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001646RepeatPentapeptide repeatInterproscan
IPR005828FamilyMajor facilitator, sugar transporter-likeInterproscan
IPR005829Conserved_siteSugar transporter, conserved siteInterproscan
IPR020846DomainMajor facilitator superfamily domainInterproscan
IPR036259Homologous_superfamilyMFS transporter superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR23511SYNAPTIC VESICLE GLYCOPROTEIN 2Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0016020Cellular ComponentmembraneInterproscan
GO:0016021Cellular ComponentmembraneInterproscan
GO:0022857Molecular Functiontransmembrane transporter activityInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for RPACG26108.1 global RNA-seq network
TOP