| Gene ID | Annotation | Contig | Start | End | Strand |
|---|---|---|---|---|---|
| RPACG25435.1 | SORTING NEXIN-4 | tig00116682 | 1253806 | 1256345 | - |
| CDS | |||||
| RPACG25435.1 | |||||
| Transcript |
| RPACG25435.1 |
| Protein |
| RPACG25435.1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00787 | PX | PX domain | Domain | Interproscan |
| PF09325 | Vps5 | Vps5 C terminal like | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001683 | Domain | Phox homology | Interproscan |
| IPR015404 | Domain | Sorting nexin/Vps5-like, C-terminal | Interproscan |
| IPR027267 | Homologous_superfamily | AH/BAR domain superfamily | Interproscan |
| IPR036871 | Homologous_superfamily | PX domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR45949 | SORTING NEXIN-4 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000407 | Cellular Component | phagophore assembly site | Interproscan |
| GO:0000422 | Biological Process | autophagy of mitochondrion | Interproscan |
| GO:0005769 | Cellular Component | early endosome | Interproscan |
| GO:0015031 | Biological Process | protein transport | Interproscan |
| GO:0032456 | Biological Process | endocytic recycling | Interproscan |
| GO:0034727 | Biological Process | piecemeal microautophagy of the nucleus | Interproscan |
| GO:0035091 | Molecular Function | phosphatidylinositol binding | Interproscan |
| GO:0061709 | Biological Process | reticulophagy | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
| 1. Expression trend for RPACG25435.1 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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