Detailed information of RPACG25409.1 in Riftia pachyptila Gene info
Gene IDAnnotationContigStartEndStrand
RPACG25409.1UBIQUITIN CARBOXYL-TERMINAL HYDROLASEtig00116682911808912837+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00443UCHUbiquitin carboxyl-terminal hydrolaseFamilyInterproscan
PF00627UBAUBA/TS-N domainDomainInterproscan
PF12030DUF3517Domain of unknown function (DUF3517)FamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001394DomainPeptidase C19, ubiquitin carboxyl-terminal hydrolaseInterproscan
IPR009060Homologous_superfamilyUBA-like superfamilyInterproscan
IPR015940DomainUbiquitin-associated domainInterproscan
IPR018200Conserved_siteUbiquitin specific protease, conserved siteInterproscan
IPR021905DomainUbiquitin C-terminal hydrolase-like, DUF3517Interproscan
IPR028889DomainUbiquitin specific protease domainInterproscan
IPR029071Homologous_superfamilyUbiquitin-like domain superfamilyInterproscan
IPR038765Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan
IPR047061DomainUbiquitin-specific peptidase 24, ubiquitin-like domainInterproscan
IPR050164FamilyUbiquitin carboxyl-terminal hydrolasesInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR24006UBIQUITIN CARBOXYL-TERMINAL HYDROLASEInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0004843Molecular Functioncysteine-type deubiquitinase activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0016579Biological Processprotein deubiquitinationInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for RPACG25409.1 global RNA-seq network
TOP