Detailed information of RPACG25310.1 in Riftia pachyptila Gene info
Gene IDAnnotationContigStartEndStrand
RPACG25310.1UNCHARACTERIZEDtig00116622122507128930-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF19031Intu_longin_1First Longin domain of INTU, CCZ1 and HPS4DomainInterproscan
PF19032Intu_longin_2Intu longin-like domain 2DomainInterproscan
PF19033Intu_longin_3Intu longin-like domain 3DomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR013176FamilyVacuolar fusion protein Ccz1Interproscan
IPR043987DomainCCZ1/INTU/HSP4, first Longin domainInterproscan
IPR043988DomainCCZ1/INTU, second Longin domainInterproscan
IPR043989DomainCCZ1/INTU/HPS4, third Longin domainInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR13056UNCHARACTERIZEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0016192Biological Processvesicle-mediated transportInterproscan
GO:0035658Cellular ComponentMon1-Ccz1 complexInterproscan
GO:0043231Cellular Componentintracellular membrane-bounded organelleInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for RPACG25310.1 global RNA-seq network
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